Detailed information of deep learning profile BP000694.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000694.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR897JAS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.07 -0.00 0.00 0.01 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.08 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.07 0.00 -0.00 0.11 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.08 -0.00 0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1976 1926 2087 2135 2177 2168 2153 2230 1988 2046 2130 1922 2097 2107 2108 2216 2115 2124 2059 1417 1760 3855 23 14 6928 52 8 12 90 7119 71 2424 2842 2052 1765 1946 1899 2024 2023 2150 2082 2169 2091 2164 2001 2055 1995 1915 2057 1983 ]
C [ 1478 1533 1505 1451 1371 1390 1343 1445 1386 1385 1460 1507 1357 1442 1397 1297 1433 1399 1373 1712 821 402 31 30 30 8 8 17 7038 7 2346 2128 1092 1467 1444 1454 1492 1636 1401 1395 1432 1305 1442 1448 1400 1490 1481 1525 1498 1593 ]
G [ 1456 1596 1654 1446 1588 1567 1601 1572 1570 1612 1323 1519 1560 1547 1695 1620 1548 1592 1628 1176 2298 2783 7 7051 42 1169 7139 0 16 20 339 946 1866 1594 1590 1674 1399 1511 1659 1569 1678 1705 1565 1504 1582 1442 1412 1463 1519 1615 ]
T [ 2249 2104 1913 2127 2023 2034 2062 1912 2215 2116 2246 2211 2145 2063 1959 2026 2063 2044 2099 2854 2280 119 7098 64 159 5930 4 7130 15 13 4403 1661 1359 2046 2360 2085 2369 1988 2076 2045 1967 1980 2061 2043 2176 2172 2271 2256 2085 1968 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.01 -0.01 0.03 -0.05 -0.04 0.06 -0.09 0.01 -0.01 -0.01 0.07 -0.04 0.01 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.01 -0.01 -0.06 0.12 -0.02 -0.05 0.08 -0.06 0.03 0.02 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.00 0.02 0.03 -0.04 0.07 -0.03 -0.03 0.11 -0.08 -0.02 0.01 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.00 -0.04 0.06 -0.00 -0.02 0.01 -0.08 0.08 -0.04 -0.06 0.03 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10195

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1336

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 364

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 294

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 127

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages