Detailed information of deep learning profile BP000691.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000691.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR331ORD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.01 0.00 0.01 0.00 -0.00 0.05 0.00 0.00 -0.00 0.01 0.02 -0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.07 -0.00 0.00 0.01 -0.00 0.00 0.00 ]
G [ 0.01 -0.00 0.00 0.01 -0.00 0.04 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.05 0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1106 1145 1168 1103 1094 1096 1167 1170 1115 1117 1109 1113 1085 1044 975 1010 930 1094 1036 976 1254 1011 818 1467 1768 1821 23 54 5131 9 299 313 1764 2708 738 1306 1138 1016 1109 1080 1062 1082 1034 1046 1151 995 1070 1132 1161 1116 ]
C [ 1547 1665 1567 1533 1618 1588 1528 1581 1558 1513 1586 1515 1554 1694 1533 1515 1899 1473 1937 1809 1718 1387 1440 1646 786 728 233 109 40 5091 84 1501 2107 782 1867 1681 1508 1586 1546 1558 1562 1526 1642 1559 1656 1635 1621 1596 1573 1500 ]
G [ 1607 1510 1546 1620 1496 1576 1538 1499 1622 1622 1546 1664 1645 1608 1853 1822 1570 1880 1509 1603 1499 2045 2137 1036 1804 2600 43 4962 124 40 4954 180 968 1116 1562 1365 1751 1732 1662 1681 1713 1696 1638 1758 1549 1616 1613 1589 1511 1580 ]
T [ 1112 1052 1091 1116 1164 1112 1139 1122 1077 1120 1131 1080 1088 1026 1011 1025 973 925 890 984 901 929 977 1223 1014 223 5073 247 77 232 35 3378 533 766 1205 1020 975 1038 1055 1053 1035 1068 1058 1009 1016 1126 1068 1055 1127 1176 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 0.01 0.02 -0.02 -0.01 0.06 -0.03 0.00 0.00 0.02 0.03 -0.00 0.01 0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.00 -0.00 0.02 -0.02 -0.02 0.07 -0.02 0.02 0.02 -0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.00 0.02 -0.02 0.04 0.01 -0.02 0.07 -0.02 -0.01 0.01 0.00 0.00 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.01 0.05 0.02 0.01 0.00 -0.02 0.04 -0.01 -0.00 0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2043

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1196

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1084

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1052

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1014

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 904

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 676

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 576

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 422

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 193

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 192

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 175

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 25

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages