Detailed information of deep learning profile BP000688.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000688.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BVL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.03 -0.00 0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 511 524 506 508 522 492 499 494 505 468 500 496 462 528 537 547 348 469 835 18 26 1783 0 1529 42 191 1990 107 631 536 504 424 482 435 458 497 496 581 498 500 528 516 480 543 499 522 536 513 550 499 ]
C [ 567 541 557 571 550 562 539 587 559 579 549 587 600 557 556 613 717 343 343 33 25 1 2080 440 27 1841 17 796 656 434 604 593 561 569 562 581 534 487 571 613 538 547 566 546 553 557 574 559 539 572 ]
G [ 527 524 498 505 509 535 538 540 519 536 562 536 518 512 553 521 398 701 736 5 1512 230 1 7 2 20 49 351 325 717 504 544 521 590 592 491 562 570 528 470 508 491 550 514 521 499 507 494 493 539 ]
T [ 481 497 525 502 505 497 510 465 503 503 475 467 506 489 440 405 623 573 172 2030 523 72 5 110 2015 34 30 832 474 399 474 525 522 492 474 517 494 448 489 503 512 532 490 483 513 508 469 520 504 476 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.02 -0.02 -0.00 -0.01 0.01 0.02 -0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 -0.00 0.01 -0.01 -0.02 0.03 -0.01 0.00 0.02 -0.01 0.01 0.00 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.01 0.02 0.00 -0.01 0.04 -0.01 -0.01 0.01 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.02 0.01 -0.00 -0.00 -0.02 0.02 -0.01 -0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 8958

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2425

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2024

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1295

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 528

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 441

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 276

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 248

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 90

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 53

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000687.1 CREB1 ENCSR000BUR Ishikawa Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages