Detailed information of deep learning profile BP000687.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000687.1
Cell line/tissue: Ishikawa
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR000BUR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.00 0.05 -0.00 0.00 0.00 -0.00 ]
C [ -0.00 -0.00 0.00 -0.00 -0.00 0.06 -0.00 0.00 0.04 -0.00 0.01 0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.00 -0.00 0.07 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 0.02 0.01 -0.00 -0.00 -0.00 0.06 -0.00 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 897 854 801 828 830 770 816 817 808 769 832 816 699 853 983 615 455 2635 67 101 45 221 4518 158 892 1030 809 706 785 793 627 709 737 838 743 795 832 823 910 862 860 864 909 866 909 810 859 886 876 858 ]
C [ 1408 1491 1466 1503 1434 1630 1517 1649 1546 1593 1566 1607 1656 1242 1434 1045 839 190 4151 39 71 4308 13 2328 1585 966 1794 1872 1294 1510 1433 1726 1467 1632 1657 1458 1539 1546 1459 1523 1439 1420 1377 1433 1431 1466 1417 1375 1457 1392 ]
G [ 1405 1376 1486 1515 1452 1378 1489 1308 1424 1409 1385 1420 1327 1477 1481 662 1903 1513 102 4469 30 54 67 742 799 1561 1326 1257 1612 1590 1705 1386 1684 1389 1422 1573 1422 1393 1396 1369 1426 1461 1428 1479 1473 1456 1458 1462 1440 1491 ]
T [ 902 891 859 766 896 834 790 838 834 841 829 769 930 1040 714 2290 1415 274 292 3 4466 29 14 1384 1336 1055 683 777 921 719 847 791 724 753 790 786 819 850 847 858 887 867 898 834 799 880 878 889 839 871 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.01 -0.01 -0.01 0.04 -0.04 -0.00 -0.01 0.02 0.05 -0.01 0.01 0.01 0.00 -0.00 ]
C [ 0.01 0.01 -0.00 -0.00 0.01 -0.01 -0.03 0.07 -0.03 -0.00 0.04 -0.04 0.01 0.00 0.00 0.01 0.01 ]
G [ 0.01 0.01 0.00 0.01 -0.02 0.02 0.01 -0.04 0.07 -0.03 -0.03 0.02 -0.01 -0.00 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.01 -0.00 0.03 0.02 -0.01 -0.00 -0.04 0.06 -0.01 -0.03 0.02 0.01 0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 335

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 97

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 46

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000681.1 CREB1 ENCSR000BRA A549 Homo sapiens MA0018.5
BP000682.1 CREB1 ENCSR000BRB A549 Homo sapiens MA0018.5
BP000683.1 CREB1 ENCSR000BRC A549 Homo sapiens MA0018.5
BP000684.1 CREB1 ENCSR000BSN H1 Homo sapiens MA0018.5
BP000685.1 CREB1 ENCSR000BSO K562 Homo sapiens MA0018.5
BP000686.1 CREB1 ENCSR000BUF GM12878 Homo sapiens MA0018.5
BP000688.1 CREB1 ENCSR000BVL HepG2 Homo sapiens MA0018.5
BP000689.1 CREB1 ENCSR112ALD HepG2 Homo sapiens MA0018.5
BP000690.1 CREB1 ENCSR214ZAV GM23338 Homo sapiens MA0018.5
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
Showing 10 profiles of page 1 from 2 pages