Detailed information of deep learning profile BP000678.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F2
Model ID: BP000678.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA1111.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P24468  
Source: ENCSR000BVM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 0.01 0.02 -0.00 -0.00 -0.00 -0.00 0.03 0.01 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 -0.00 ]
G [ 0.00 -0.00 -0.00 0.00 0.00 0.03 0.03 -0.00 -0.00 0.00 -0.00 0.00 0.01 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2635 2508 2621 2528 2507 2713 2557 2511 2712 2477 2577 2678 2497 2360 2460 2505 2810 2674 2564 2279 1917 2017 4281 4335 7208 48 629 45 40 9421 4312 3592 1946 2157 1797 2376 2513 2923 2629 2509 2559 2765 2496 2552 2520 2633 2465 2555 2813 2567 ]
C [ 2060 2171 2094 2233 2225 2203 2129 2083 2168 2267 2357 2173 2412 2284 2097 2018 2021 1871 2245 2456 3070 3766 2157 1036 10 115 16 315 9116 69 1573 1480 1198 1953 2692 2389 2414 2008 2005 2161 2277 2282 2290 2365 2189 2135 2267 2187 2133 2116 ]
G [ 2572 2537 2604 2557 2564 2395 2661 2787 2496 2336 2378 2552 2454 2312 2430 2906 2630 3037 2846 3006 2528 1789 1730 3568 2343 9454 8199 265 100 127 2598 3291 4940 3228 2456 2523 2340 2403 2816 2317 2640 2226 2590 2330 2534 2563 2373 2572 2441 2474 ]
T [ 2392 2443 2340 2341 2363 2348 2312 2278 2283 2579 2347 2256 2296 2703 2672 2230 2198 2077 2004 1918 2144 2087 1491 720 98 42 815 9034 403 42 1176 1296 1575 2321 2714 2371 2392 2325 2209 2672 2183 2386 2283 2412 2416 2328 2554 2345 2272 2502 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 0.01 0.02 -0.01 -0.01 -0.02 -0.02 0.03 0.01 0.00 -0.00 -0.00 -0.01 ]
C [ 0.00 0.01 0.01 0.00 -0.00 -0.02 -0.01 -0.02 -0.00 0.03 -0.02 -0.00 0.00 -0.00 -0.00 0.00 ]
G [ 0.01 0.00 0.00 0.00 0.01 0.01 0.04 0.03 -0.00 -0.01 0.00 -0.00 0.00 0.01 0.01 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.01 -0.02 -0.01 0.01 0.03 0.00 -0.02 -0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3782

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3364

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3037

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1857

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 694

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 640

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 437

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 254

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 77

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 51

CWM

PFM

     

HCWM

4 profiles found for the same TF (NR2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000676.1 NR2F2 ENCSR000BRS K562 Homo sapiens MA1111.2
BP000677.1 NR2F2 ENCSR000BUY MCF-7 Homo sapiens MA1111.2
BP000679.1 NR2F2 ENCSR168SMX liver Homo sapiens MA1111.2
BP000680.1 NR2F2 ENCSR338MMB liver Homo sapiens MA1111.2
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