Detailed information of deep learning profile BP000677.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F2 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F2
Model ID: BP000677.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA1111.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P24468  
Source: ENCSR000BUY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 -0.00 0.00 0.06 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.06 0.06 0.00 0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.05 -0.00 0.00 0.00 -0.00 0.00 0.00 0.01 0.01 ]
T [ -0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 -0.00 0.03 0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 2272 2380 2463 2522 2374 2403 2455 2379 2432 2247 2390 2384 2408 2434 2749 2177 2387 2527 1141 2002 6 257 9383 50 38 5 1007 1921 2220 2255 2327 2117 2301 2147 2358 2403 2422 2333 2258 2307 2608 2457 2350 2335 2391 2440 2361 2267 2443 2416 ]
C [ 2457 2426 2405 2337 2281 2501 2207 2256 2081 2323 2433 2581 2298 2320 2397 2864 2636 2706 3342 2892 86 39 117 9457 9483 1956 3156 1421 1726 2116 2359 2772 2973 2700 2643 2436 2377 2500 2525 2372 2191 2392 2494 2423 2316 2408 2305 2470 2442 2319 ]
G [ 2113 2140 2224 2232 2201 2161 2254 2338 2522 2212 2148 1947 2163 2715 2196 2201 2277 1668 2275 1838 4 9233 30 0 0 2 1434 2273 3380 3238 2521 2335 1790 1760 1869 2067 2242 2157 2170 2179 2183 2126 2128 2141 2038 2176 2267 2150 2096 2150 ]
T [ 2688 2584 2438 2439 2674 2465 2614 2557 2495 2748 2559 2618 2661 2061 2188 2288 2230 2629 2772 2798 9434 1 0 23 9 7567 3933 3915 2204 1921 2323 2306 2466 2923 2660 2624 2489 2540 2577 2672 2548 2555 2558 2631 2785 2506 2597 2643 2549 2645 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.01 -0.00 -0.04 0.01 0.06 -0.01 -0.00 -0.04 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 -0.01 0.00 0.06 0.06 0.02 0.01 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.03 0.06 -0.01 -0.06 -0.03 -0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 0.05 -0.05 -0.06 -0.01 -0.02 0.04 0.01 0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2733

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2634

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2088

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1669

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 1300

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 961

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 887

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 816

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 269

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 256

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 186

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_27

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_28

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_29

Num. of seqlets: 20

CWM

PFM

     

HCWM

4 profiles found for the same TF (NR2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000676.1 NR2F2 ENCSR000BRS K562 Homo sapiens MA1111.2
BP000678.1 NR2F2 ENCSR000BVM HepG2 Homo sapiens MA1111.2
BP000679.1 NR2F2 ENCSR168SMX liver Homo sapiens MA1111.2
BP000680.1 NR2F2 ENCSR338MMB liver Homo sapiens MA1111.2
Showing 4 profiles of page 1 from 1 pages
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