Detailed information of deep learning profile BP000678.1

This page shows detailed deep learning-derived predictions and motifs for NR2F2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F2
Model ID: BP000678.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA1111.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P24468  
Source: ENCSR000BVM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.01 0.00 -0.00 0.00 -0.00 -0.00 0.03 0.03 0.00 0.00 -0.00 -0.00 0.00 ]
G [ -0.00 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 0.01 0.03 -0.00 -0.00 -0.00 -0.00 0.02 0.01 0.01 -0.00 -0.00 ]

Frequency matrix

A [ 2502 2272 2345 2554 2328 2416 2412 2283 2386 2183 2672 2209 2325 2392 2371 2714 2321 1575 1296 1176 42 403 9034 815 42 98 720 1491 2087 2144 1918 2004 2077 2198 2230 2672 2703 2296 2256 2347 2579 2283 2278 2312 2348 2363 2341 2340 2443 2392 ]
C [ 2474 2441 2572 2373 2563 2534 2330 2590 2226 2640 2317 2816 2403 2340 2523 2456 3228 4940 3291 2598 127 100 265 8199 9454 2343 3568 1730 1789 2528 3006 2846 3037 2630 2906 2430 2312 2454 2552 2378 2336 2496 2787 2661 2395 2564 2557 2604 2537 2572 ]
G [ 2116 2133 2187 2267 2135 2189 2365 2290 2282 2277 2161 2005 2008 2414 2389 2692 1953 1198 1480 1573 69 9116 315 16 115 10 1036 2157 3766 3070 2456 2245 1871 2021 2018 2097 2284 2412 2173 2357 2267 2168 2083 2129 2203 2225 2233 2094 2171 2060 ]
T [ 2567 2813 2555 2465 2633 2520 2552 2496 2765 2559 2509 2629 2923 2513 2376 1797 2157 1946 3592 4312 9421 40 45 629 48 7208 4335 4281 2017 1917 2279 2564 2674 2810 2505 2460 2360 2497 2678 2577 2477 2712 2511 2557 2713 2507 2528 2621 2508 2635 ]

Hypothetical CWM

A [ 0.00 0.00 -0.00 -0.00 -0.01 -0.02 0.00 0.03 0.01 -0.01 -0.02 -0.01 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.00 -0.00 0.00 -0.01 -0.00 0.03 0.04 0.01 0.01 0.00 0.00 0.00 0.01 ]
G [ 0.00 -0.00 -0.00 0.00 -0.00 -0.02 0.03 -0.00 -0.02 -0.01 -0.02 -0.00 0.00 0.01 0.01 0.00 ]
T [ -0.01 -0.00 -0.00 0.00 0.01 0.03 -0.02 -0.02 -0.01 -0.01 0.02 0.01 0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3782

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3364

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3037

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1857

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 694

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 640

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 437

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 254

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 231

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 135

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 77

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 76

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 51

4 profiles found for the same TF (NR2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000676.1 NR2F2 ENCSR000BRS K562 Homo sapiens MA1111.2
BP000677.1 NR2F2 ENCSR000BUY MCF-7 Homo sapiens MA1111.2
BP000679.1 NR2F2 ENCSR168SMX liver Homo sapiens MA1111.2
BP000680.1 NR2F2 ENCSR338MMB liver Homo sapiens MA1111.2
Showing 4 profiles of page 1 from 1 pages
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