Detailed information of deep learning profile BP000677.1

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This page shows detailed deep learning-derived predictions and motifs for NR2F2 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F2
Model ID: BP000677.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
JASPAR ID: MA1111.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P24468  
Source: ENCSR000BUY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.01 0.00 0.03 -0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.00 -0.00 0.00 0.00 -0.00 0.05 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.06 0.06 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.06 0.00 -0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2645 2549 2643 2597 2506 2785 2631 2558 2555 2548 2672 2577 2540 2489 2624 2660 2923 2466 2306 2323 1921 2204 3915 3933 7567 9 23 0 1 9434 2798 2772 2629 2230 2288 2188 2061 2661 2618 2559 2748 2495 2557 2614 2465 2674 2439 2438 2584 2688 ]
C [ 2150 2096 2150 2267 2176 2038 2141 2128 2126 2183 2179 2170 2157 2242 2067 1869 1760 1790 2335 2521 3238 3380 2273 1434 2 0 0 30 9233 4 1838 2275 1668 2277 2201 2196 2715 2163 1947 2148 2212 2522 2338 2254 2161 2201 2232 2224 2140 2113 ]
G [ 2319 2442 2470 2305 2408 2316 2423 2494 2392 2191 2372 2525 2500 2377 2436 2643 2700 2973 2772 2359 2116 1726 1421 3156 1956 9483 9457 117 39 86 2892 3342 2706 2636 2864 2397 2320 2298 2581 2433 2323 2081 2256 2207 2501 2281 2337 2405 2426 2457 ]
T [ 2416 2443 2267 2361 2440 2391 2335 2350 2457 2608 2307 2258 2333 2422 2403 2358 2147 2301 2117 2327 2255 2220 1921 1007 5 38 50 9383 257 6 2002 1141 2527 2387 2177 2749 2434 2408 2384 2390 2247 2432 2379 2455 2403 2374 2522 2463 2380 2272 ]

Hypothetical CWM

   
A [ -0.01 -0.01 0.01 0.01 0.04 -0.02 -0.01 -0.06 -0.05 0.05 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 -0.01 -0.03 -0.06 -0.01 0.06 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 0.02 0.06 0.06 0.00 -0.01 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.04 -0.00 -0.01 0.06 0.01 -0.04 -0.00 -0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3253

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2733

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2634

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2088

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1669

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1564

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 1331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 1300

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 961

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 887

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 816

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 269

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 256

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 198

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 186

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_27

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_28

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_29

Num. of seqlets: 20

CWM

PFM

     

HCWM

4 profiles found for the same TF (NR2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000676.1 NR2F2 ENCSR000BRS K562 Homo sapiens MA1111.2
BP000678.1 NR2F2 ENCSR000BVM HepG2 Homo sapiens MA1111.2
BP000679.1 NR2F2 ENCSR168SMX liver Homo sapiens MA1111.2
BP000680.1 NR2F2 ENCSR338MMB liver Homo sapiens MA1111.2
Showing 4 profiles of page 1 from 1 pages
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