Detailed information of deep learning profile BP000612.1

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This page shows detailed deep learning-derived predictions and motifs for MYC in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000612.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DLZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.01 0.07 0.00 0.07 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.06 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 736 796 739 781 787 746 743 752 725 779 788 699 747 737 698 712 745 709 898 1268 683 21 3921 2 5 382 25 236 499 602 665 639 676 783 736 702 703 760 779 711 774 722 754 812 738 750 736 735 735 737 ]
C [ 1356 1371 1329 1342 1348 1305 1368 1372 1342 1470 1307 1487 1416 1292 1382 1529 1382 1353 1047 1169 1502 4145 49 4187 3 1163 60 434 2068 1418 1303 1462 1337 1267 1426 1297 1324 1283 1341 1406 1369 1334 1394 1307 1326 1385 1282 1373 1334 1288 ]
G [ 1363 1310 1432 1375 1340 1376 1388 1367 1443 1239 1395 1318 1280 1385 1367 1333 1462 1470 1746 1147 1633 17 218 5 4219 43 3983 3084 822 1337 1498 1394 1482 1474 1404 1505 1487 1431 1395 1383 1342 1413 1385 1327 1362 1328 1410 1393 1398 1387 ]
T [ 773 751 728 730 753 801 729 737 718 740 738 724 785 814 781 654 639 696 537 644 410 45 40 34 1 2640 160 474 839 871 762 733 733 704 662 724 714 754 713 728 743 759 695 782 802 765 800 727 761 816 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 0.00 0.00 0.05 -0.06 0.03 -0.01 -0.04 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.07 -0.06 0.07 -0.06 0.04 -0.04 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.04 0.04 -0.06 0.08 -0.06 0.06 0.02 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.02 -0.04 -0.01 0.03 -0.06 0.04 0.00 0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1692

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1533

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1109

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000611.1 MYC ENCSR000DLU endothelial cell of umbilical vein Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages