Detailed information of deep learning profile BP000611.1

  1. Home
  2. Deep Learning Profile > BP000611.1
This page shows detailed deep learning-derived predictions and motifs for MYC in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000611.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DLU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 -0.00 0.06 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.07 0.00 0.10 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.10 0.00 0.06 0.01 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.04 -0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 308 312 293 317 310 314 317 285 272 309 300 283 301 293 312 273 274 325 297 278 393 549 278 12 1493 0 1 85 19 83 239 304 293 238 298 309 308 272 278 304 289 248 293 266 310 311 284 274 307 294 ]
C [ 502 424 430 437 455 455 451 469 456 476 439 482 459 505 481 510 547 510 477 415 403 383 496 1502 2 1526 0 210 11 183 667 477 397 471 454 476 461 437 443 447 434 537 466 455 469 476 461 494 460 487 ]
G [ 432 488 497 477 464 447 471 472 497 449 485 448 473 440 449 471 417 432 502 575 568 352 668 12 31 0 1529 4 1436 1021 300 421 501 494 523 471 468 489 522 470 496 454 467 491 450 436 476 456 456 466 ]
T [ 288 306 310 299 301 314 291 304 305 296 306 317 297 292 288 276 292 263 254 262 166 246 88 4 4 4 0 1231 64 243 324 328 339 327 255 274 293 332 287 309 311 291 304 318 301 307 309 306 307 283 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.06 -0.06 0.04 -0.01 -0.03 -0.02 -0.01 -0.00 -0.01 ]
C [ 0.01 0.01 0.01 0.01 0.07 -0.08 0.10 -0.10 0.05 -0.04 0.02 0.02 0.02 0.01 ]
G [ 0.01 0.01 0.01 0.02 -0.04 0.05 -0.10 0.10 -0.08 0.07 0.01 -0.00 0.01 0.01 ]
T [ -0.01 -0.00 -0.01 -0.02 -0.03 -0.02 0.04 -0.05 0.05 0.00 0.01 0.01 -0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1042

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 836

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 460

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 66

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000608.1 MYC ENCSR000DKU GM12878 Homo sapiens MA0147.4
BP000609.1 MYC ENCSR000DLN HeLa-S3 Homo sapiens MA0147.4
BP000610.1 MYC ENCSR000DLR HepG2 Homo sapiens MA0147.4
BP000612.1 MYC ENCSR000DLZ K562 Homo sapiens MA0147.4
BP000613.1 MYC ENCSR000DMJ MCF-7 Homo sapiens MA0147.4
BP000614.1 MYC ENCSR000DMM MCF-7 Homo sapiens MA0147.4
BP000615.1 MYC ENCSR000DMP MCF-7 Homo sapiens MA0147.4
BP000616.1 MYC ENCSR000DMQ MCF-7 Homo sapiens MA0147.4
BP000617.1 MYC ENCSR000DOM MCF 10A Homo sapiens MA0147.4
BP000618.1 MYC ENCSR000DOS MCF 10A Homo sapiens MA0147.4
Showing 10 profiles of page 1 from 3 pages