JASPAR - REST - BP000599.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for REST in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	REST
Model ID:	BP000599.1
Cell line/tissue:	HEK293
Class:	C2H2 zinc finger factors
Family:	Factors with multiple dispersed zinc fingers
JASPAR ID:	MA0138.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q13127
Source:	ENCSR896UBV
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_1

Number of seqlets: 4616

Contribution weight matrix (CWM)

A [	0.00	-0.00	0.01	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.03	0.00	-0.00	0.00	-0.00	0.01	-0.00	-0.00	-0.00	0.03	0.01	]
C [	-0.00	0.00	0.03	-0.00	0.12	-0.00	0.00	-0.00	0.16	0.14	-0.00	-0.00	-0.00	0.00	0.00	0.00	0.08	0.00	-0.00	-0.00	0.00	]
G [	0.03	0.02	-0.00	0.04	-0.00	0.00	0.06	-0.00	-0.00	0.00	0.00	-0.00	0.08	0.15	0.00	0.01	0.00	-0.00	0.04	0.00	-0.00	]
T [	-0.00	0.00	-0.00	-0.00	0.00	0.12	-0.00	0.08	-0.00	-0.00	-0.01	0.02	-0.00	-0.00	0.13	-0.00	-0.00	0.04	-0.00	-0.00	-0.00	]

Frequency matrix

A [	1132	1103	1059	1062	1195	1077	1059	1125	1053	1009	909	989	992	1086	1252	848	402	1336	846	40	25	248	179	6	13	2727	1383	244	5	15	952	260	265	724	2291	1757	1099	1154	1102	1185	1093	1203	1055	1041	1093	986	969	1065	1125	1183	]
C [	1289	1256	1276	1156	1147	1235	1173	1148	1141	1128	1262	1221	1508	1271	600	265	988	2014	598	4333	35	702	86	4496	4454	407	288	33	6	16	1095	3436	809	492	685	1091	1234	1231	1210	1163	1328	1184	1251	1262	1208	1230	1210	1214	1244	1219	]
G [	1216	1180	1165	1228	1242	1225	1291	1363	1146	1525	1165	1325	1081	1114	1533	2818	2443	159	2352	35	24	3582	373	7	8	597	574	4191	4593	11	2133	500	314	2786	1109	924	1225	1109	1058	1164	1112	1087	1191	1108	1208	1247	1203	1227	1121	1092	]
T [	979	1077	1116	1170	1032	1079	1093	980	1276	954	1280	1081	1035	1145	1231	685	783	1107	820	208	4532	84	3978	107	141	885	2371	148	12	4574	436	420	3228	614	531	844	1058	1122	1246	1104	1083	1142	1119	1205	1107	1153	1234	1110	1126	1122	]

Hypothetical CWM

A [	0.00	0.00	0.01	0.00	0.01	-0.02	0.02	0.00	-0.05	-0.06	0.02	-0.01	-0.03	-0.06	0.06	0.02	0.01	-0.03	-0.04	0.03	-0.03	-0.03	0.00	0.04	0.02	0.01	]
C [	0.01	0.01	0.01	0.00	-0.02	0.02	0.07	-0.01	0.13	-0.02	0.03	-0.04	0.16	0.14	-0.01	0.00	0.00	-0.03	-0.03	0.02	0.09	0.02	-0.01	-0.00	0.01	0.02	]
G [	0.01	0.01	0.01	0.03	0.05	0.04	-0.05	0.08	-0.03	0.00	0.09	0.02	-0.07	-0.02	0.04	0.00	0.08	0.15	-0.04	0.04	0.01	0.00	0.05	0.01	-0.01	0.01	]
T [	0.00	0.00	0.01	0.01	0.00	0.02	0.01	-0.01	0.01	0.12	-0.06	0.10	-0.00	0.01	-0.01	0.04	-0.02	-0.03	0.13	-0.02	-0.02	0.05	0.00	-0.02	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5637

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 863

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 794

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 297

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 228

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 139

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 137

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 131

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 120

CWM

PFM

HCWM

27 profiles found for the same TF (REST) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000592.1	REST	ENCSR054JMQ	K562	Homo sapiens	MA0138.3
BP000593.1	REST	ENCSR137ZMQ	K562	Homo sapiens	MA0138.3
BP000594.1	REST	ENCSR663WAR	H1	Homo sapiens	MA0138.3
BP000595.1	REST	ENCSR867WPH	liver	Homo sapiens	MA0138.3
BP000596.1	REST	ENCSR871KYB	GM23338	Homo sapiens	MA0138.3
BP000597.1	REST	ENCSR892DRK	A549	Homo sapiens	MA0138.3
BP000598.1	REST	ENCSR893QWP	liver	Homo sapiens	MA0138.3