JASPAR - REST - BP000594.1 - profile summary

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	REST
Model ID:	BP000594.1
Cell line/tissue:	H1
Class:	C2H2 zinc finger factors
Family:	Factors with multiple dispersed zinc fingers
JASPAR ID:	MA0138.3
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	Q13127
Source:	ENCSR663WAR
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 2224

Contribution weight matrix (CWM)

A [	-0.00	-0.00	-0.01	0.00	-0.01	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.02	-0.01	-0.00	0.00	-0.00	0.00	-0.00	-0.00	-0.00	0.07	0.03	0.00	-0.00	-0.01	]
C [	-0.00	-0.00	0.01	0.04	0.00	0.17	-0.00	0.00	-0.00	0.23	0.20	-0.00	0.00	0.00	0.00	0.00	0.01	0.21	0.00	-0.00	-0.00	0.00	0.01	0.00	0.01	]
G [	0.02	0.05	0.04	-0.00	0.07	-0.00	0.00	0.09	-0.00	0.00	0.00	0.01	0.00	0.13	0.24	0.00	0.04	0.00	0.00	0.13	0.00	-0.00	0.00	0.00	0.01	]
T [	-0.00	-0.00	-0.00	-0.00	-0.01	-0.00	0.14	-0.00	0.10	-0.00	-0.00	-0.01	0.01	-0.00	-0.00	0.20	-0.01	-0.00	0.10	-0.00	-0.00	-0.00	-0.00	-0.00	-0.01	]

Frequency matrix

A [	543	509	488	492	581	501	518	533	455	466	387	405	402	457	554	371	200	624	386	27	19	130	82	3	6	1202	547	115	2	6	277	11	19	145	1523	1073	582	532	539	542	512	572	520	452	461	463	434	444	518	541	]
C [	630	664	626	552	590	605	564	568	577	554	641	661	817	618	287	102	465	998	268	2090	12	361	44	2183	2160	188	181	14	3	15	552	2168	85	64	242	513	643	653	597	574	682	587	617	647	639	655	615	640	612	612	]
G [	606	581	592	645	572	626	688	744	599	770	591	685	496	562	803	1467	1223	75	1219	15	22	1695	155	7	4	434	300	2047	2214	2	1223	23	14	1913	379	317	539	488	513	591	549	527	574	552	613	615	586	600	526	537	]
T [	445	470	518	535	481	492	454	379	593	434	605	473	509	587	580	284	336	527	351	92	2171	38	1943	31	54	400	1196	48	5	2201	172	22	2106	102	80	321	460	551	575	517	481	538	513	573	511	491	589	540	568	534	]

Hypothetical CWM

A [	-0.01	-0.00	-0.00	-0.01	0.01	-0.06	0.02	-0.01	-0.08	-0.07	0.02	-0.04	-0.01	-0.09	0.06	0.01	0.02	-0.06	-0.08	0.03	-0.09	-0.13	0.00	0.10	0.05	0.01	-0.01	-0.01	]
C [	0.02	0.03	0.02	0.02	-0.03	0.06	0.11	0.03	0.18	-0.03	0.05	-0.01	0.23	0.21	-0.00	0.06	0.02	-0.01	-0.03	0.08	0.21	0.06	-0.06	0.02	0.03	0.04	0.03	0.04	]
G [	0.02	0.03	0.02	0.06	0.08	0.07	-0.08	0.13	-0.04	0.02	0.12	0.05	-0.10	0.04	0.09	0.04	0.14	0.24	-0.03	0.09	0.00	0.03	0.14	0.05	-0.03	0.03	0.02	0.05	]
T [	-0.00	-0.01	-0.00	-0.01	-0.01	0.01	-0.00	-0.04	0.00	0.14	-0.09	0.11	-0.04	-0.04	-0.03	0.04	-0.06	-0.03	0.20	-0.06	-0.03	0.10	-0.02	-0.08	0.00	-0.00	0.01	-0.01	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1217

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1102

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 455

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 296

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 208

CWM

PFM

HCWM

27 profiles found for the same TF (REST) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000592.1	REST	ENCSR054JMQ	K562	Homo sapiens	MA0138.3
BP000593.1	REST	ENCSR137ZMQ	K562	Homo sapiens	MA0138.3
BP000595.1	REST	ENCSR867WPH	liver	Homo sapiens	MA0138.3
BP000596.1	REST	ENCSR871KYB	GM23338	Homo sapiens	MA0138.3
BP000597.1	REST	ENCSR892DRK	A549	Homo sapiens	MA0138.3
BP000598.1	REST	ENCSR893QWP	liver	Homo sapiens	MA0138.3
BP000599.1	REST	ENCSR896UBV	HEK293	Homo sapiens	MA0138.3