Detailed information of deep learning profile BP000571.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000571.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR853DWE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.07 0.08 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.01 0.01 -0.00 0.07 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.07 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 6115 6168 6078 6011 6574 6757 6146 6351 6275 7613 6304 6656 6153 6484 6350 6098 7435 6651 6262 7412 6378 6754 10758 52 166 8809 3593 87 5151 22600 23182 740 7971 6178 4856 6162 5959 5646 6054 6174 7846 6231 6318 5963 6067 7534 7440 6130 6183 6224 ]
C [ 5443 4654 4447 4618 5357 4728 5805 5770 6078 4535 4740 4581 6053 4824 4556 4667 4936 4676 4901 3640 5562 2913 3319 104 111 223 5121 98 14227 619 7 5847 7602 5200 6598 4960 4686 6425 4991 6106 4631 5684 4617 4735 6201 4639 4627 5826 5915 4618 ]
G [ 4867 4916 6182 4894 4490 5189 4765 4699 4708 4949 6113 5948 4561 4548 5991 6286 5099 6149 5052 7247 5802 6443 8171 49 8679 8986 2826 22947 30 1 8 2924 2993 4474 4112 5434 6212 5078 4755 4677 4813 4828 4552 6153 4627 4748 5012 4781 4638 4662 ]
T [ 6796 7483 6514 7698 6800 6547 6505 6401 6160 6124 6064 6036 6454 7365 6324 6170 5751 5745 7006 4922 5479 7111 973 23016 14265 5203 11681 89 3813 1 24 13710 4655 7369 7655 6665 6364 6072 7421 6264 5931 6478 7734 6370 6326 6300 6142 6484 6485 7717 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.02 -0.04 -0.05 0.02 -0.02 -0.01 0.01 0.07 0.08 -0.04 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.02 -0.04 -0.06 0.06 -0.02 0.05 0.01 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.03 0.03 -0.02 0.07 -0.08 -0.04 -0.03 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.03 0.07 0.05 0.01 0.01 -0.02 0.02 -0.06 -0.04 0.03 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5339

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 820

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 384

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 31

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages