Detailed information of deep learning profile BP000571.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000571.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR853DWE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.07 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.07 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.08 0.07 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 7717 6485 6484 6142 6300 6326 6370 7734 6478 5931 6264 7421 6072 6364 6665 7655 7369 4655 13710 24 1 3813 89 11681 5203 14265 23016 973 7111 5479 4922 7006 5745 5751 6170 6324 7365 6454 6036 6064 6124 6160 6401 6505 6547 6800 7698 6514 7483 6796 ]
C [ 4662 4638 4781 5012 4748 4627 6153 4552 4828 4813 4677 4755 5078 6212 5434 4112 4474 2993 2924 8 1 30 22947 2826 8986 8679 49 8171 6443 5802 7247 5052 6149 5099 6286 5991 4548 4561 5948 6113 4949 4708 4699 4765 5189 4490 4894 6182 4916 4867 ]
G [ 4618 5915 5826 4627 4639 6201 4735 4617 5684 4631 6106 4991 6425 4686 4960 6598 5200 7602 5847 7 619 14227 98 5121 223 111 104 3319 2913 5562 3640 4901 4676 4936 4667 4556 4824 6053 4581 4740 4535 6078 5770 5805 4728 5357 4618 4447 4654 5443 ]
T [ 6224 6183 6130 7440 7534 6067 5963 6318 6231 7846 6174 6054 5646 5959 6162 4856 6178 7971 740 23182 22600 5151 87 3593 8809 166 52 10758 6754 6378 7412 6262 6651 7435 6098 6350 6484 6153 6656 6304 7613 6275 6351 6146 6757 6574 6011 6078 6168 6115 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.03 -0.04 -0.06 0.02 -0.02 0.01 0.01 0.05 0.07 -0.03 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.03 -0.04 -0.08 0.07 -0.02 0.03 0.03 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.01 0.05 -0.02 0.06 -0.06 -0.04 -0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.04 0.08 0.07 0.01 -0.01 -0.02 0.02 -0.05 -0.04 0.02 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5339

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 820

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 384

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 31

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages