Detailed information of deep learning profile BP000548.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000548.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BSR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.10 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.10 -0.00 0.02 0.01 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.06 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.11 0.10 0.00 -0.00 -0.00 0.01 0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 9164 6302 6301 5870 5920 6087 6010 8926 5999 5744 6038 8783 5723 5700 6463 8193 8247 4333 15240 1 1 2534 61 11700 5059 14600 24257 627 7223 5391 4588 8589 5350 5419 6074 6246 8743 5981 5643 5857 5780 6105 6379 6390 6202 7246 8747 6320 8652 6997 ]
C [ 4581 4585 4994 5435 4668 4746 7712 4583 4962 4786 4738 4637 4901 8038 6246 3925 4207 3075 2846 1 0 2 24140 2496 10775 9674 35 9922 6616 5788 9152 4911 7847 5208 7918 7636 4570 4670 7813 7790 5178 4704 4661 4822 5998 4582 5035 7639 4974 4794 ]
G [ 4736 7816 7324 4661 4792 7784 4746 4942 7629 4750 7812 5214 8542 4765 5048 7696 5351 9323 5795 0 166 18410 51 7173 175 48 76 3097 2614 7152 3673 4907 4993 5059 4673 4604 4834 7812 4663 4807 4621 7615 7497 7241 4931 6379 4936 4552 4954 6887 ]
T [ 5924 5702 5786 8439 9025 5788 5937 5954 5815 9125 5817 5771 5239 5902 6648 4591 6600 7674 524 24403 24238 3459 153 3036 8396 83 37 10759 7952 6074 6992 5998 6215 8719 5740 5919 6258 5942 6286 5951 8826 5981 5868 5952 7274 6198 5687 5894 5825 5727 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.01 0.04 -0.06 -0.09 0.02 -0.02 0.01 0.02 0.08 0.10 -0.04 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.04 -0.06 -0.10 0.10 -0.03 0.04 0.03 -0.05 0.04 0.02 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.03 -0.06 0.01 0.07 -0.03 0.08 -0.08 -0.06 -0.03 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.02 -0.05 0.11 0.11 0.02 -0.01 -0.03 0.03 -0.07 -0.05 0.04 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2443

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2007

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1753

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 722

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 250

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 238

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages