Detailed information of deep learning profile BP000544.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000544.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BQI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.10 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.09 -0.00 0.02 0.01 0.00 0.01 0.00 0.00 0.01 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.00 0.06 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.11 0.11 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5061 5099 5562 5921 7702 5502 5524 5188 5162 5447 5264 7781 5542 5199 5339 7659 5092 5004 5633 6996 6777 3772 12494 16 6 2502 133 10799 4805 13057 22117 749 6059 4611 4280 7324 4695 4751 5223 5462 7570 5268 5167 5291 5308 5300 5406 5465 5398 6332 ]
C [ 4961 5744 5620 4607 4638 4643 4779 5483 4609 4553 7080 4598 4939 4656 4637 4561 4934 7387 5899 4266 4593 3153 3141 8 4 6 21890 2626 10345 9130 51 9551 6595 5652 8382 5061 7106 5201 7189 7006 4448 4641 7093 7127 5026 4655 4655 4845 5736 4450 ]
G [ 6558 4590 5646 6422 4742 6950 6862 4736 4782 7073 4805 4680 6834 4614 7176 4819 7635 4730 5046 7066 5213 8689 6040 8 182 16510 86 5726 213 39 107 3223 2759 6899 3816 4693 4956 4899 4626 4488 4796 7316 4457 4684 4423 7026 6915 6613 4777 6033 ]
T [ 5751 6898 5503 5381 5249 5236 5166 6924 7778 5258 5182 5272 5016 7862 5179 5292 4670 5210 5753 4003 5748 6717 656 22299 22139 3313 222 3180 6968 105 56 8808 6918 5169 5853 5253 5574 7480 5293 5375 5517 5106 5614 5229 7574 5350 5355 5408 6420 5516 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.01 0.04 -0.05 -0.08 0.02 -0.01 0.01 0.03 0.07 0.10 -0.04 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.02 0.00 0.00 -0.03 -0.05 -0.10 0.09 -0.02 0.04 0.04 -0.04 0.04 0.03 0.02 0.02 0.01 ]
G [ 0.02 0.02 0.02 0.02 0.04 -0.05 0.01 0.07 -0.02 0.08 -0.07 -0.06 -0.02 0.00 0.00 0.02 0.01 0.01 ]
T [ -0.01 -0.01 -0.00 0.02 -0.05 0.11 0.11 0.02 -0.01 -0.02 0.03 -0.06 -0.06 0.04 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2615

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1846

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1453

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 858

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 441

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 440

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 119

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 67

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages