Detailed information of deep learning profile BP000558.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000558.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR182OZC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.06 -0.00 0.00 -0.00 -0.00 ]
C [ -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.06 0.06 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2466 2715 2459 2560 2412 2399 2483 2383 2798 2457 2290 2431 2611 2338 2526 2658 2934 2690 1863 5093 11 0 1326 25 4506 2075 5553 8718 354 2788 2078 1929 2460 2233 2264 2287 2487 2687 2523 2348 2367 2387 2406 2455 2506 2478 2609 2733 2529 2755 ]
C [ 1767 1802 1833 1871 1810 1863 1738 2112 1767 1911 1803 1857 1824 2036 2146 1919 1606 1786 1201 1189 6 1 9 8690 1103 3357 3115 9 2924 2435 2299 2584 1918 2157 1912 2142 2028 1773 1680 2028 2171 1839 1864 1867 1844 1889 1791 1844 2108 1916 ]
G [ 2036 1826 2073 1980 1797 1816 2188 1888 1760 1960 1760 2106 1898 2153 1741 1878 2378 2023 2560 2159 7 97 5337 21 1677 52 39 23 1376 1169 1948 1422 1866 1845 1887 1923 1815 1859 2132 1825 1835 1802 2073 2025 2053 1832 1915 1807 1716 1736 ]
T [ 2488 2414 2392 2346 2738 2679 2348 2374 2432 2429 2904 2363 2424 2230 2344 2302 1839 2258 3133 316 8733 8659 2085 21 1471 3273 50 7 4103 2365 2432 2822 2513 2522 2694 2405 2427 2438 2422 2556 2384 2729 2414 2410 2354 2558 2442 2373 2404 2350 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.02 -0.03 -0.04 0.01 -0.01 0.00 0.01 0.04 0.06 -0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.03 -0.04 -0.06 0.05 -0.02 0.02 0.02 -0.03 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.01 0.02 -0.03 0.00 0.03 -0.02 0.04 -0.05 -0.03 -0.02 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.03 0.06 0.06 0.01 -0.01 -0.02 0.02 -0.04 -0.03 0.02 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2153

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 205

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 31

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages