Detailed information of deep learning profile BP000570.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000570.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR752AQK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.08 0.09 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.03 0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.01 -0.00 0.08 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.08 0.04 0.00 0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5823 5726 5798 5641 6089 6603 5829 5916 6057 7634 5876 6242 5759 6137 5902 5743 7480 6416 5913 7074 5981 6696 10413 52 134 8458 3248 67 4874 21742 22143 548 7495 5950 4558 5881 5769 5274 5833 5938 7843 5827 5908 5780 5684 7491 7284 5782 5790 5885 ]
C [ 5405 4406 4225 4231 5150 4400 5694 5801 6004 4227 4354 4201 6019 4528 4204 4310 4707 4324 4679 3371 5549 2695 2990 83 86 175 5212 67 13699 413 3 5509 7489 4889 6435 4640 4273 6523 4624 6056 4336 5658 4396 4382 6143 4401 4334 5762 6072 4293 ]
G [ 4476 4608 5907 4654 4219 5009 4418 4332 4298 4577 6053 5976 4301 4142 6005 6219 4674 6119 4593 7095 5419 6069 7982 46 8380 8833 2586 21966 12 2 4 2612 2832 3990 3797 5328 6219 4664 4432 4341 4375 4534 4221 6109 4361 4377 4669 4476 4227 4297 ]
T [ 6456 7420 6230 7634 6702 6148 6219 6111 5801 5722 5877 5741 6081 7353 6049 5888 5299 5301 6975 4620 5211 6700 775 21979 13560 4694 11114 60 3575 3 10 13491 4344 7331 7370 6311 5899 5699 7271 5825 5606 6141 7635 5889 5972 5891 5873 6140 6071 7685 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.03 -0.05 -0.05 0.03 -0.03 -0.01 0.01 0.08 0.09 -0.04 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.02 -0.05 -0.07 0.07 -0.03 0.05 0.02 -0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.04 0.03 0.03 -0.02 0.08 -0.09 -0.05 -0.03 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 -0.04 0.08 0.06 0.01 0.01 -0.02 0.02 -0.06 -0.05 0.03 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 163

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 26

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages