Detailed information of deep learning profile BP000570.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000570.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR752AQK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.08 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.08 -0.00 0.01 0.01 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.03 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.09 0.08 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 7685 6071 6140 5873 5891 5972 5889 7635 6141 5606 5825 7271 5699 5899 6311 7370 7331 4344 13491 10 3 3575 60 11114 4694 13560 21979 775 6700 5211 4620 6975 5301 5299 5888 6049 7353 6081 5741 5877 5722 5801 6111 6219 6148 6702 7634 6230 7420 6456 ]
C [ 4297 4227 4476 4669 4377 4361 6109 4221 4534 4375 4341 4432 4664 6219 5328 3797 3990 2832 2612 4 2 12 21966 2586 8833 8380 46 7982 6069 5419 7095 4593 6119 4674 6219 6005 4142 4301 5976 6053 4577 4298 4332 4418 5009 4219 4654 5907 4608 4476 ]
G [ 4293 6072 5762 4334 4401 6143 4382 4396 5658 4336 6056 4624 6523 4273 4640 6435 4889 7489 5509 3 413 13699 67 5212 175 86 83 2990 2695 5549 3371 4679 4324 4707 4310 4204 4528 6019 4201 4354 4227 6004 5801 5694 4400 5150 4231 4225 4406 5405 ]
T [ 5885 5790 5782 7284 7491 5684 5780 5908 5827 7843 5938 5833 5274 5769 5881 4558 5950 7495 548 22143 21742 4874 67 3248 8458 134 52 10413 6696 5981 7074 5913 6416 7480 5743 5902 6137 5759 6242 5876 7634 6057 5916 5829 6603 6089 5641 5798 5726 5823 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.01 0.03 -0.05 -0.06 0.02 -0.02 0.01 0.01 0.06 0.08 -0.04 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.03 -0.05 -0.09 0.08 -0.02 0.03 0.03 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.05 0.02 0.05 -0.03 0.07 -0.07 -0.05 -0.02 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.04 0.09 0.08 0.01 -0.01 -0.03 0.03 -0.05 -0.05 0.03 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 189

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 163

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 26

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages