Detailed information of deep learning profile BP000569.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000569.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR701TCU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.08 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.07 -0.00 0.01 0.01 -0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.09 0.08 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5529 7018 5682 5657 5404 5509 5663 5573 6914 5632 5261 5297 6647 5221 5474 5923 6857 6569 4028 12504 20 0 2602 73 10167 4492 12812 20319 802 6283 4873 4366 6321 4914 5005 5411 5782 6622 5760 5386 5362 5323 5396 5581 5788 5744 6094 6868 5703 6682 ]
C [ 4078 3993 4053 4316 4324 4210 3916 5426 3938 4344 4095 4102 4035 4545 5598 4703 3491 3875 2706 2493 17 0 10 20323 2211 8172 7476 58 7316 5788 5091 6505 4367 5637 4489 5570 5319 3956 3966 5340 5398 4317 4136 4178 4167 4594 4039 4208 5470 4331 ]
G [ 5265 4164 5390 5168 4049 4113 5598 4116 4126 5075 3960 5463 4382 5759 4066 4402 5922 4592 6699 4957 9 199 14134 42 5246 233 89 66 2820 2454 5018 3143 4344 4264 4400 4117 3994 4187 5392 3999 4218 4031 5446 5189 5083 4123 4707 4086 3937 4053 ]
T [ 5642 5339 5389 5373 6737 6682 5337 5399 5536 5463 7198 5652 5450 4989 5376 5486 4244 5478 7081 560 20468 20315 3768 76 2890 7617 137 71 9576 5989 5532 6500 5482 5699 6620 5416 5419 5749 5396 5789 5536 6843 5536 5566 5476 6053 5674 5352 5404 5448 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.04 -0.04 -0.07 0.02 -0.01 0.01 0.01 0.06 0.08 -0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 -0.00 -0.04 -0.05 -0.08 0.08 -0.03 0.03 0.02 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.05 0.00 0.05 -0.03 0.06 -0.07 -0.05 -0.03 0.00 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 -0.04 0.09 0.08 0.01 -0.01 -0.02 0.02 -0.06 -0.04 0.03 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4165

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1521

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 287

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 181

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages