Detailed information of deep learning profile BP000569.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000569.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR701TCU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.08 0.09 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.01 -0.00 0.07 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.08 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5448 5404 5352 5674 6053 5476 5566 5536 6843 5536 5789 5396 5749 5419 5416 6620 5699 5482 6500 5532 5989 9576 71 137 7617 2890 76 3768 20315 20468 560 7081 5478 4244 5486 5376 4989 5450 5652 7198 5463 5536 5399 5337 6682 6737 5373 5389 5339 5642 ]
C [ 4053 3937 4086 4707 4123 5083 5189 5446 4031 4218 3999 5392 4187 3994 4117 4400 4264 4344 3143 5018 2454 2820 66 89 233 5246 42 14134 199 9 4957 6699 4592 5922 4402 4066 5759 4382 5463 3960 5075 4126 4116 5598 4113 4049 5168 5390 4164 5265 ]
G [ 4331 5470 4208 4039 4594 4167 4178 4136 4317 5398 5340 3966 3956 5319 5570 4489 5637 4367 6505 5091 5788 7316 58 7476 8172 2211 20323 10 0 17 2493 2706 3875 3491 4703 5598 4545 4035 4102 4095 4344 3938 5426 3916 4210 4324 4316 4053 3993 4078 ]
T [ 6682 5703 6868 6094 5744 5788 5581 5396 5323 5362 5386 5760 6622 5782 5411 5005 4914 6321 4366 4873 6283 802 20319 12812 4492 10167 73 2602 0 20 12504 4028 6569 6857 5923 5474 5221 6647 5297 5261 5632 6914 5573 5663 5509 5404 5657 5682 7018 5529 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.03 -0.04 -0.06 0.02 -0.02 -0.01 0.01 0.08 0.09 -0.04 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 -0.00 0.00 -0.03 -0.05 -0.07 0.06 -0.03 0.05 0.00 -0.05 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.04 0.02 0.03 -0.03 0.08 -0.08 -0.05 -0.04 -0.00 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.03 0.08 0.06 0.01 0.01 -0.01 0.02 -0.07 -0.04 0.04 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4165

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1521

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 287

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 181

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 100

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages