Detailed information of deep learning profile BP000567.1

  1. Home
  2. Deep Learning Profile > BP000567.1
This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000567.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR606ZTC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.07 0.08 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.01 0.01 -0.00 0.07 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.07 0.04 0.00 0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5140 5148 5206 5567 5697 5202 5371 5337 6420 5294 5569 5256 5592 5270 5272 6124 5615 5388 6210 5292 5501 9116 46 112 7183 3146 65 4392 19391 19527 561 6884 5203 4106 5160 5121 4768 5255 5325 6615 5251 5434 5204 5149 6206 6302 5242 5287 5272 5305 ]
C [ 3827 3792 3884 4298 4004 4747 4728 4989 3794 4111 3908 4970 4051 3886 3957 4234 4135 4156 3058 4625 2493 2786 63 80 188 4030 52 12183 152 2 4830 6160 4407 5356 4211 3916 5366 4259 4953 3868 4703 3837 3956 5073 4029 3979 4728 4914 3787 4875 ]
G [ 4227 5015 4094 3852 4284 4001 3981 3993 4119 4963 4796 3780 3761 4866 5097 4324 4993 4185 6058 4964 5438 6860 29 6982 7711 2375 19386 18 0 1 2501 2608 3805 3591 4371 5143 4361 3940 3929 3980 4148 3820 5041 3850 4051 4122 4042 3907 3979 4006 ]
T [ 6349 5588 6359 5826 5558 5593 5463 5224 5210 5175 5270 5537 6139 5521 5217 4861 4800 5814 4217 4662 6111 781 19405 12369 4461 9992 40 2950 0 13 11651 3891 6128 6490 5801 5363 5048 6089 5336 5080 5441 6452 5342 5471 5257 5140 5531 5435 6505 5357 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.02 -0.04 -0.05 0.02 -0.02 -0.01 0.01 0.07 0.08 -0.04 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.00 0.01 -0.00 0.00 -0.03 -0.05 -0.06 0.05 -0.03 0.05 0.01 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.03 0.03 -0.02 0.07 -0.08 -0.05 -0.04 -0.00 -0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.03 0.07 0.05 0.01 0.01 -0.01 0.02 -0.06 -0.04 0.03 -0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3872

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1209

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages