Detailed information of deep learning profile BP000567.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000567.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR606ZTC
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 0.00 0.00 0.04 0.07 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.07 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.08 0.07 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5357 6505 5435 5531 5140 5257 5471 5342 6452 5441 5080 5336 6089 5048 5363 5801 6490 6128 3891 11651 13 0 2950 40 9992 4461 12369 19405 781 6111 4662 4217 5814 4800 4861 5217 5521 6139 5537 5270 5175 5210 5224 5463 5593 5558 5826 6359 5588 6349 ]
C [ 4006 3979 3907 4042 4122 4051 3850 5041 3820 4148 3980 3929 3940 4361 5143 4371 3591 3805 2608 2501 1 0 18 19386 2375 7711 6982 29 6860 5438 4964 6058 4185 4993 4324 5097 4866 3761 3780 4796 4963 4119 3993 3981 4001 4284 3852 4094 5015 4227 ]
G [ 4875 3787 4914 4728 3979 4029 5073 3956 3837 4703 3868 4953 4259 5366 3916 4211 5356 4407 6160 4830 2 152 12183 52 4030 188 80 63 2786 2493 4625 3058 4156 4135 4234 3957 3886 4051 4970 3908 4111 3794 4989 4728 4747 4004 4298 3884 3792 3827 ]
T [ 5305 5272 5287 5242 6302 6206 5149 5204 5434 5251 6615 5325 5255 4768 5121 5160 4106 5203 6884 561 19527 19391 4392 65 3146 7183 112 46 9116 5501 5292 6210 5388 5615 6124 5272 5270 5592 5256 5569 5294 6420 5337 5371 5202 5697 5567 5206 5148 5140 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.01 0.03 -0.04 -0.06 0.02 -0.01 0.01 0.01 0.05 0.07 -0.03 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 -0.00 -0.04 -0.05 -0.08 0.07 -0.02 0.03 0.03 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.01 0.05 -0.03 0.05 -0.06 -0.05 -0.03 0.00 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.04 0.08 0.07 0.01 -0.01 -0.02 0.02 -0.05 -0.04 0.02 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3872

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1209

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1131

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 321

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 228

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages