Detailed information of deep learning profile BP000566.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000566.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR474DCX
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.09 0.10 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.04 0.00 0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.01 0.01 -0.00 0.08 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.09 0.04 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5948 5996 5978 5685 6319 6889 6093 6119 6168 8065 6151 6470 5861 6471 6044 5913 7792 6529 5944 7254 6167 7072 10817 61 142 8719 3222 86 4494 22850 23066 574 7623 6296 4749 6138 5938 5455 6011 6054 8231 5977 6146 5950 5869 8113 7908 5935 5980 5980 ]
C [ 5763 4445 4187 4463 5394 4547 6098 6227 6571 4320 4475 4331 6496 4638 4328 4415 4905 4531 4939 3474 6014 2829 2982 94 73 197 5989 71 15315 238 7 5497 8100 5070 6789 4871 4491 7169 4833 6540 4584 6127 4534 4520 6728 4462 4436 6140 6481 4508 ]
G [ 4578 4725 6543 4749 4427 5305 4549 4451 4425 4734 6402 6418 4419 4281 6311 6646 4884 6634 4737 7616 5525 6265 8461 69 8671 9331 2586 22876 10 0 5 2621 2885 4065 3807 5556 6643 4608 4388 4386 4509 4583 4209 6536 4384 4443 4787 4590 4325 4279 ]
T [ 6800 7923 6381 8192 6949 6348 6349 6292 5925 5970 6061 5870 6313 7699 6406 6115 5508 5395 7469 4745 5383 6923 829 22865 14203 4842 11292 56 3270 1 11 14397 4481 7658 7744 6524 6017 5857 7857 6109 5765 6402 8200 6083 6108 6071 5958 6424 6303 8322 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.00 0.03 -0.05 -0.06 0.03 -0.03 -0.01 0.02 0.09 0.10 -0.04 0.01 0.00 -0.01 -0.00 ]
C [ 0.01 0.00 0.01 0.00 -0.00 -0.03 -0.06 -0.07 0.07 -0.03 0.05 0.01 -0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.04 0.03 0.03 -0.03 0.08 -0.09 -0.05 -0.04 -0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.03 0.09 0.06 0.01 0.01 -0.02 0.02 -0.07 -0.05 0.04 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4906

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 511

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 241

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 212

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 22

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages