Detailed information of deep learning profile BP000566.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000566.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR474DCX
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 0.00 0.00 0.04 0.09 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.08 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.04 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.10 0.09 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 8322 6303 6424 5958 6071 6108 6083 8200 6402 5765 6109 7857 5857 6017 6524 7744 7658 4481 14397 11 1 3270 56 11292 4842 14203 22865 829 6923 5383 4745 7469 5395 5508 6115 6406 7699 6313 5870 6061 5970 5925 6292 6349 6348 6949 8192 6381 7923 6800 ]
C [ 4279 4325 4590 4787 4443 4384 6536 4209 4583 4509 4386 4388 4608 6643 5556 3807 4065 2885 2621 5 0 10 22876 2586 9331 8671 69 8461 6265 5525 7616 4737 6634 4884 6646 6311 4281 4419 6418 6402 4734 4425 4451 4549 5305 4427 4749 6543 4725 4578 ]
G [ 4508 6481 6140 4436 4462 6728 4520 4534 6127 4584 6540 4833 7169 4491 4871 6789 5070 8100 5497 7 238 15315 71 5989 197 73 94 2982 2829 6014 3474 4939 4531 4905 4415 4328 4638 6496 4331 4475 4320 6571 6227 6098 4547 5394 4463 4187 4445 5763 ]
T [ 5980 5980 5935 7908 8113 5869 5950 6146 5977 8231 6054 6011 5455 5938 6138 4749 6296 7623 574 23066 22850 4494 86 3222 8719 142 61 10817 7072 6167 7254 5944 6529 7792 5913 6044 6471 5861 6470 6151 8065 6168 6119 6093 6889 6319 5685 5978 5996 5948 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.04 -0.05 -0.07 0.02 -0.02 0.01 0.01 0.06 0.09 -0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 -0.00 -0.04 -0.05 -0.09 0.08 -0.03 0.03 0.03 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.05 0.01 0.05 -0.03 0.07 -0.07 -0.06 -0.03 -0.00 0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.01 0.00 0.01 -0.04 0.10 0.09 0.02 -0.01 -0.03 0.03 -0.06 -0.05 0.03 -0.00 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4906

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 939

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 511

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 241

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 212

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 25

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 22

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages