Detailed information of deep learning profile BP000564.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000564.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR416QLJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.10 0.11 -0.00 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 0.06 0.00 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.02 -0.00 0.09 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.10 0.04 0.00 0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5875 5941 6067 5708 6645 7777 6094 6591 6526 9498 6473 6750 5903 6458 6007 6037 9712 6494 6388 7895 6720 8154 12843 39 46 10033 1745 3017 2318 24064 24192 205 8916 6886 4711 6670 6446 5603 6096 6485 9830 6262 6428 6257 6041 9890 9864 6475 6275 5895 ]
C [ 6565 4237 3816 4562 5961 4088 7167 7304 7703 4153 4025 3748 8184 4558 3875 3924 4370 4233 4590 3152 6977 2395 2114 55 40 85 10045 366 20024 156 17 5344 9345 4700 7619 4666 4123 8650 4585 7937 4436 7573 4609 4077 8056 4206 3773 6817 7612 4192 ]
G [ 4483 4378 7668 4212 4211 5790 4340 4002 3955 4695 7404 7945 3946 3943 7481 7934 4425 7742 4121 8416 4898 5626 8976 25 10941 8714 1507 20357 14 0 16 2013 2506 3586 3225 6323 7497 3971 3839 3734 3979 4061 3851 7307 3949 3974 4561 4606 3917 3828 ]
T [ 7321 9688 6693 9762 7427 6589 6643 6347 6060 5898 6342 5801 6211 9285 6881 6349 5737 5775 9145 4781 5649 8069 311 24125 13217 5412 10947 504 1888 24 19 16682 3477 9072 8689 6585 6178 6020 9724 6088 5999 6348 9356 6603 6198 6174 6046 6346 6440 10329 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 -0.00 0.05 -0.06 -0.06 0.04 -0.02 0.00 0.02 0.10 0.11 -0.05 0.03 0.00 -0.00 0.00 ]
C [ 0.01 0.00 0.01 -0.00 0.01 -0.02 -0.05 -0.08 0.10 -0.04 0.07 0.02 -0.05 0.04 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.04 -0.05 0.04 0.05 -0.03 0.11 -0.10 -0.04 -0.03 0.01 -0.00 0.01 0.00 0.01 ]
T [ 0.00 -0.00 0.00 0.02 -0.04 0.10 0.08 0.03 0.01 -0.02 0.03 -0.06 -0.05 0.05 -0.01 0.00 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1480

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1019

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 316

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 218

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 22

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages