Detailed information of deep learning profile BP000564.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000564.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR416QLJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.00 0.00 0.04 0.10 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.09 -0.00 0.02 0.01 -0.00 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.06 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 -0.00 0.11 0.10 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 10329 6440 6346 6046 6174 6198 6603 9356 6348 5999 6088 9724 6020 6178 6585 8689 9072 3477 16682 19 24 1888 504 10947 5412 13217 24125 311 8069 5649 4781 9145 5775 5737 6349 6881 9285 6211 5801 6342 5898 6060 6347 6643 6589 7427 9762 6693 9688 7321 ]
C [ 3828 3917 4606 4561 3974 3949 7307 3851 4061 3979 3734 3839 3971 7497 6323 3225 3586 2506 2013 16 0 14 20357 1507 8714 10941 25 8976 5626 4898 8416 4121 7742 4425 7934 7481 3943 3946 7945 7404 4695 3955 4002 4340 5790 4211 4212 7668 4378 4483 ]
G [ 4192 7612 6817 3773 4206 8056 4077 4609 7573 4436 7937 4585 8650 4123 4666 7619 4700 9345 5344 17 156 20024 366 10045 85 40 55 2114 2395 6977 3152 4590 4233 4370 3924 3875 4558 8184 3748 4025 4153 7703 7304 7167 4088 5961 4562 3816 4237 6565 ]
T [ 5895 6275 6475 9864 9890 6041 6257 6428 6262 9830 6485 6096 5603 6446 6670 4711 6886 8916 205 24192 24064 2318 3017 1745 10033 46 39 12843 8154 6720 7895 6388 6494 9712 6037 6007 6458 5903 6750 6473 9498 6526 6591 6094 7777 6645 5708 6067 5941 5875 ]

Hypothetical CWM

   
A [ 0.01 0.01 0.00 -0.01 0.05 -0.05 -0.06 0.03 -0.02 0.01 0.03 0.08 0.10 -0.04 0.02 0.00 -0.00 0.00 ]
C [ 0.01 0.00 0.01 -0.00 0.01 -0.03 -0.04 -0.10 0.11 -0.03 0.05 0.04 -0.05 0.04 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.04 -0.05 0.02 0.07 -0.04 0.10 -0.08 -0.05 -0.02 0.01 -0.00 0.01 0.00 0.01 ]
T [ 0.00 -0.00 0.00 0.03 -0.05 0.11 0.10 0.02 0.00 -0.02 0.04 -0.06 -0.06 0.05 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1480

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1019

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 316

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 313

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 218

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 63

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 52

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 22

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages