Detailed information of deep learning profile BP000560.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000560.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR216GEB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 0.08 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.07 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.08 0.08 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 6216 7668 6362 6408 6050 6225 6286 6245 7644 6321 5971 6119 7247 5928 6304 6803 7731 7369 4507 13840 9 2 3442 63 11660 5206 14307 22916 816 7267 5432 4868 6879 5609 5549 6054 6425 7285 6377 6062 6175 6080 6022 6350 6526 6493 6804 7569 6495 7525 ]
C [ 4718 4576 4639 4750 4891 4706 4557 6007 4515 4852 4763 4638 4718 5139 6197 5261 4072 4498 3024 2824 4 2 17 22811 2676 9134 8568 33 8295 6435 5661 7162 4942 6081 5076 6135 5885 4435 4513 5925 5982 4995 4695 4716 4721 5108 4561 4755 6020 4872 ]
G [ 5876 4631 5860 5760 4690 4723 6138 4745 4501 5681 4530 6019 4910 6417 4606 4989 6564 5164 7504 5828 4 199 14671 73 5234 200 70 75 3106 2801 5617 3658 4849 4698 4994 4724 4562 4813 6062 4555 4703 4413 5984 5807 5649 4738 5254 4671 4444 4564 ]
T [ 6248 6183 6197 6140 7427 7404 6077 6061 6398 6204 7794 6282 6183 5574 5951 6005 4691 6027 8023 566 23041 22855 4928 111 3488 8518 113 34 10841 6555 6348 7370 6388 6670 7439 6145 6186 6525 6106 6516 6198 7570 6357 6185 6162 6719 6439 6063 6099 6097 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.01 0.03 -0.04 -0.06 0.02 -0.02 0.01 0.01 0.06 0.08 -0.03 0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.04 -0.05 -0.08 0.07 -0.02 0.03 0.03 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.04 0.01 0.05 -0.03 0.06 -0.07 -0.05 -0.03 0.00 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.04 0.08 0.08 0.01 -0.01 -0.02 0.02 -0.05 -0.04 0.03 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4655

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1585

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1416

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 287

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 229

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 164

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages