Detailed information of deep learning profile BP000559.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000559.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR190VMK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 0.00 0.00 0.04 0.07 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.07 -0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.08 0.07 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 7827 6381 6413 6157 6239 6309 6244 7747 6354 6001 6133 7447 5899 6222 6713 7631 7302 4525 13862 16 1 3527 59 11375 5166 14649 22755 862 7118 5436 4914 7075 5604 5626 6189 6408 7380 6313 6061 6169 6075 6076 6409 6435 6496 6882 7695 6438 7482 6721 ]
C [ 4473 4506 4675 4862 4656 4479 6103 4422 4866 4607 4547 4615 4957 6264 5305 3981 4206 2937 2769 5 0 28 22744 2660 8934 8082 54 8129 6215 5759 7248 4898 6213 4929 6142 5932 4344 4456 5963 6000 4719 4638 4601 4666 5106 4453 4761 6068 4842 4785 ]
G [ 4614 5991 5741 4480 4589 6148 4549 4502 5599 4558 6093 4880 6565 4429 4907 6495 5191 7602 5645 5 235 14518 67 5515 167 86 89 3212 2917 5469 3458 4860 4561 4915 4513 4430 4690 6104 4453 4624 4445 6082 5747 5705 4558 5159 4533 4331 4539 5317 ]
T [ 6037 6073 6122 7452 7467 6015 6055 6280 6132 7785 6178 6009 5530 6036 6026 4844 6252 7887 675 22925 22715 4878 81 3401 8684 134 53 10748 6701 6287 7331 6118 6573 7481 6107 6181 6537 6078 6474 6158 7712 6155 6194 6145 6791 6457 5962 6114 6088 6128 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.03 -0.04 -0.06 0.02 -0.02 0.01 0.02 0.06 0.07 -0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.00 -0.03 -0.04 -0.08 0.07 -0.02 0.03 0.03 -0.04 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 -0.04 0.01 0.05 -0.03 0.06 -0.07 -0.04 -0.02 0.00 -0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.04 0.08 0.08 0.01 -0.01 -0.02 0.03 -0.05 -0.04 0.03 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1018

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 454

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 240

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages