Detailed information of deep learning profile BP000555.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000555.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EEX
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.01 -0.01 -0.00 -0.00 0.14 0.15 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.00 -0.00 0.00 -0.00 -0.00 0.02 -0.00 0.09 0.00 -0.00 0.01 0.01 0.00 0.01 ]
G [ 0.01 0.00 0.01 0.02 0.00 0.03 0.03 -0.00 0.12 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.13 0.06 0.00 0.01 -0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5349 5953 5271 5210 5262 6711 5082 5539 5179 5445 5339 4972 6316 5353 5215 5663 5105 5971 8213 79 157 7294 3175 330 3011 21618 21779 736 6712 5485 4175 5474 5189 4728 5333 5017 6757 5008 5236 5136 5081 6654 6105 5060 5114 5118 5141 5414 6217 5540 ]
C [ 5856 5056 6073 6252 6415 4646 5078 4881 6532 5145 4742 5053 5327 5218 4938 4199 6260 3062 3678 131 102 410 4958 277 16195 182 6 6262 7747 5453 6670 5208 4977 6911 5132 6627 4858 6147 4830 5031 6414 5060 5042 6347 6416 5051 5999 5315 4850 6020 ]
G [ 4786 5501 5086 5073 5022 5307 6551 6342 4966 4804 6282 6662 5460 6578 5407 7680 5882 6617 9044 75 9612 9173 3226 20868 1 4 17 3447 3513 4958 4587 5568 6787 5308 4908 4936 4984 5227 4966 6470 4901 4957 5512 5019 4999 5056 4837 5681 5663 5202 ]
T [ 5818 5299 5379 5274 5110 5145 5098 5047 5132 6415 5446 5122 4706 4660 6249 4267 4562 6159 874 21524 11938 4932 10450 334 2602 5 7 11364 3837 5913 6377 5559 4856 4862 6436 5229 5210 5427 6777 5172 5413 5138 5150 5383 5280 6584 5832 5399 5079 5047 ]

Hypothetical CWM

   
A [ -0.01 -0.00 -0.01 -0.01 0.05 -0.08 -0.07 0.04 -0.04 -0.01 0.01 0.14 0.15 -0.07 0.02 -0.01 -0.01 -0.01 ]
C [ 0.02 0.02 0.03 0.00 0.00 -0.02 -0.08 -0.09 0.11 -0.03 0.11 0.02 -0.07 0.06 0.03 0.02 0.03 0.02 ]
G [ 0.02 0.03 0.02 0.04 0.06 -0.06 0.06 0.06 -0.03 0.13 -0.13 -0.08 -0.04 0.00 0.01 0.02 0.02 0.02 ]
T [ -0.01 -0.01 -0.00 0.01 -0.06 0.13 0.09 0.02 0.02 -0.03 0.03 -0.10 -0.08 0.06 -0.02 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 589

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 496

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 410

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 396

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 361

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 301

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 153

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 106

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages