Detailed information of deep learning profile BP000555.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000555.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EEX
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 0.01 0.00 0.06 0.13 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.12 -0.00 0.03 0.03 0.00 0.02 0.01 0.00 0.01 ]
G [ 0.01 0.00 0.01 0.01 -0.00 0.00 0.09 -0.00 0.02 -0.00 -0.00 0.00 -0.00 0.00 0.01 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.15 0.14 -0.00 -0.00 -0.01 0.01 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5047 5079 5399 5832 6584 5280 5383 5150 5138 5413 5172 6777 5427 5210 5229 6436 4862 4856 5559 6377 5913 3837 11364 7 5 2602 334 10450 4932 11938 21524 874 6159 4562 4267 6249 4660 4706 5122 5446 6415 5132 5047 5098 5145 5110 5274 5379 5299 5818 ]
C [ 5202 5663 5681 4837 5056 4999 5019 5512 4957 4901 6470 4966 5227 4984 4936 4908 5308 6787 5568 4587 4958 3513 3447 17 4 1 20868 3226 9173 9612 75 9044 6617 5882 7680 5407 6578 5460 6662 6282 4804 4966 6342 6551 5307 5022 5073 5086 5501 4786 ]
G [ 6020 4850 5315 5999 5051 6416 6347 5042 5060 6414 5031 4830 6147 4858 6627 5132 6911 4977 5208 6670 5453 7747 6262 6 182 16195 277 4958 410 102 131 3678 3062 6260 4199 4938 5218 5327 5053 4742 5145 6532 4881 5078 4646 6415 6252 6073 5056 5856 ]
T [ 5540 6217 5414 5141 5118 5114 5060 6105 6654 5081 5136 5236 5008 6757 5017 5333 4728 5189 5474 4175 5485 6712 736 21779 21618 3011 330 3175 7294 157 79 8213 5971 5105 5663 5215 5353 6316 4972 5339 5445 5179 5539 5082 6711 5262 5210 5271 5953 5349 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.02 0.06 -0.08 -0.10 0.03 -0.03 0.02 0.02 0.09 0.13 -0.06 0.01 -0.00 -0.01 -0.01 ]
C [ 0.02 0.02 0.02 0.01 0.00 -0.04 -0.08 -0.13 0.13 -0.03 0.06 0.06 -0.06 0.06 0.04 0.02 0.03 0.02 ]
G [ 0.02 0.03 0.02 0.03 0.06 -0.07 0.02 0.11 -0.03 0.11 -0.09 -0.08 -0.02 0.00 0.00 0.03 0.02 0.02 ]
T [ -0.01 -0.01 -0.01 0.02 -0.07 0.15 0.14 0.01 -0.01 -0.04 0.04 -0.07 -0.08 0.05 -0.01 -0.01 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 589

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 496

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 410

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 396

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 361

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 301

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 153

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 106

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages