Detailed information of deep learning profile BP000554.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000554.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EEE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.13 0.14 -0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.02 0.00 0.07 0.00 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.02 0.03 -0.00 0.13 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 0.12 0.06 0.00 0.01 -0.00 0.00 0.00 -0.00 0.04 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 7299 7462 7209 7083 7698 8370 7284 7757 7999 9455 7427 8157 7305 7947 7474 7011 9266 8037 7847 9135 7730 7297 14970 71 131 10560 2677 50 4254 27152 27307 378 11256 8714 6050 7691 7889 6873 7226 7802 9653 7249 7829 7568 7050 9219 9014 7349 7207 7362 ]
C [ 6379 5069 4906 5288 6145 5098 6650 6802 6912 4837 5056 4796 7210 5205 4834 5099 5697 5169 5498 3994 6550 2842 2361 116 58 218 5179 69 19460 156 1 6101 8771 5645 7283 5825 5232 7943 5797 7185 5349 7025 5070 5061 7470 5209 5082 6905 7235 5152 ]
G [ 5400 5551 7398 5341 5041 6003 5220 5231 5220 5963 7132 7117 5123 4990 6959 7144 5328 7138 5228 8428 6103 7104 9454 56 11155 12312 2180 27153 3 1 3 2559 3250 4667 4135 5670 6992 5192 5063 4931 5185 5381 4983 6967 5160 5173 5903 5202 4994 4945 ]
T [ 8236 9232 7801 9602 8430 7843 8160 7524 7183 7059 7699 7244 7676 9172 8047 8060 7023 6970 8741 5757 6931 10071 529 27071 15970 4224 17278 42 3597 5 3 18276 4037 8288 9846 8128 7201 7306 9228 7396 7127 7659 9432 7718 7634 7713 7315 7858 7878 9855 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.01 0.05 -0.07 -0.08 0.04 -0.03 -0.00 0.02 0.13 0.14 -0.07 0.03 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.03 -0.07 -0.09 0.11 -0.02 0.09 0.03 -0.07 0.05 0.03 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.05 -0.06 0.06 0.06 -0.02 0.13 -0.12 -0.07 -0.04 0.00 -0.00 0.02 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.02 -0.06 0.12 0.09 0.03 0.02 -0.03 0.03 -0.10 -0.08 0.06 -0.01 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1383

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 499

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 387

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 379

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 26

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 20

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 20

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 20

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages