Detailed information of deep learning profile BP000554.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000554.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EEE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.04 -0.00 0.00 0.00 -0.00 0.01 0.00 0.06 0.12 -0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.13 -0.00 0.03 0.02 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.07 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 0.14 0.13 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 9855 7878 7858 7315 7713 7634 7718 9432 7659 7127 7396 9228 7306 7201 8128 9846 8288 4037 18276 3 5 3597 42 17278 4224 15970 27071 529 10071 6931 5757 8741 6970 7023 8060 8047 9172 7676 7244 7699 7059 7183 7524 8160 7843 8430 9602 7801 9232 8236 ]
C [ 4945 4994 5202 5903 5173 5160 6967 4983 5381 5185 4931 5063 5192 6992 5670 4135 4667 3250 2559 3 1 3 27153 2180 12312 11155 56 9454 7104 6103 8428 5228 7138 5328 7144 6959 4990 5123 7117 7132 5963 5220 5231 5220 6003 5041 5341 7398 5551 5400 ]
G [ 5152 7235 6905 5082 5209 7470 5061 5070 7025 5349 7185 5797 7943 5232 5825 7283 5645 8771 6101 1 156 19460 69 5179 218 58 116 2361 2842 6550 3994 5498 5169 5697 5099 4834 5205 7210 4796 5056 4837 6912 6802 6650 5098 6145 5288 4906 5069 6379 ]
T [ 7362 7207 7349 9014 9219 7050 7568 7829 7249 9653 7802 7226 6873 7889 7691 6050 8714 11256 378 27307 27152 4254 50 2677 10560 131 71 14970 7297 7730 9135 7847 8037 9266 7011 7474 7947 7305 8157 7427 9455 7999 7757 7284 8370 7698 7083 7209 7462 7299 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.00 -0.01 0.06 -0.08 -0.10 0.03 -0.03 0.02 0.03 0.09 0.12 -0.06 0.02 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.02 -0.00 0.00 -0.04 -0.07 -0.12 0.13 -0.02 0.06 0.06 -0.06 0.05 0.03 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.05 -0.07 0.03 0.09 -0.02 0.11 -0.09 -0.07 -0.03 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.03 -0.07 0.14 0.13 0.02 -0.00 -0.03 0.04 -0.08 -0.07 0.05 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1383

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 600

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 499

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 387

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 379

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 26

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 20

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 20

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 20

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages