Detailed information of deep learning profile BP000553.1

  1. Home
  2. Deep Learning Profile > BP000553.1
This page shows detailed deep learning-derived predictions and motifs for CEBPB in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000553.1
Cell line/tissue: HeLa-S3
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EDA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.05 0.12 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.14 -0.00 0.02 0.02 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.00 0.06 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 0.15 0.12 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 6630 7849 6763 6828 6426 6611 6844 6571 7629 6785 6050 6353 7309 6215 6614 7022 8042 7113 4582 14819 1 1 3695 11 13648 4227 13705 23228 663 7782 5834 5153 7027 6007 6003 6786 6934 7411 6651 6384 6638 6342 6259 6720 6769 6836 6955 7665 6734 7416 ]
C [ 4563 4424 4574 4685 4984 4743 4583 5695 4500 4587 4510 4415 4573 5128 5681 4834 3848 4094 2747 2436 8 6 17 23403 2324 8475 9543 69 7623 6550 5837 6936 4895 5831 4876 5785 5628 4407 4478 5636 5743 4917 4645 4604 4700 4989 4591 4719 5892 4873 ]
G [ 5564 4536 5625 5564 4589 4542 5780 4567 4535 5398 4623 5781 5105 6199 4576 5116 6334 5260 7445 5858 1 182 15504 26 4738 190 86 89 3000 2641 4906 3569 4816 4527 5186 4486 4396 4670 5809 4431 4645 4524 5671 5560 5409 4547 5061 4642 4363 4585 ]
T [ 6698 6646 6493 6378 7456 7559 6248 6622 6791 6685 8272 6906 6468 5913 6584 6483 5231 6988 8681 342 23445 23266 4239 15 2745 10563 121 69 12169 6482 6878 7797 6717 7090 7390 6398 6497 6967 6517 7004 6429 7672 6880 6571 6577 7083 6848 6429 6466 6581 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.01 0.06 -0.08 -0.09 0.05 -0.03 0.02 0.02 0.09 0.12 -0.06 0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.01 -0.04 -0.08 -0.15 0.14 -0.04 0.05 0.06 -0.07 0.04 0.03 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.04 -0.09 0.03 0.09 -0.05 0.11 -0.11 -0.08 -0.03 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.02 -0.06 0.15 0.12 0.02 -0.01 -0.04 0.05 -0.07 -0.07 0.05 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4889

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 882

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 786

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 637

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 453

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 291

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 95

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages