Detailed information of deep learning profile BP000553.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000553.1
Cell line/tissue: HeLa-S3
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EDA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.12 0.15 -0.00 0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.06 0.00 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.02 0.02 -0.00 0.14 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.12 0.05 0.00 0.01 0.00 0.00 0.00 0.00 0.04 -0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 6581 6466 6429 6848 7083 6577 6571 6880 7672 6429 7004 6517 6967 6497 6398 7390 7090 6717 7797 6878 6482 12169 69 121 10563 2745 15 4239 23266 23445 342 8681 6988 5231 6483 6584 5913 6468 6906 8272 6685 6791 6622 6248 7559 7456 6378 6493 6646 6698 ]
C [ 4585 4363 4642 5061 4547 5409 5560 5671 4524 4645 4431 5809 4670 4396 4486 5186 4527 4816 3569 4906 2641 3000 89 86 190 4738 26 15504 182 1 5858 7445 5260 6334 5116 4576 6199 5105 5781 4623 5398 4535 4567 5780 4542 4589 5564 5625 4536 5564 ]
G [ 4873 5892 4719 4591 4989 4700 4604 4645 4917 5743 5636 4478 4407 5628 5785 4876 5831 4895 6936 5837 6550 7623 69 9543 8475 2324 23403 17 6 8 2436 2747 4094 3848 4834 5681 5128 4573 4415 4510 4587 4500 5695 4583 4743 4984 4685 4574 4424 4563 ]
T [ 7416 6734 7665 6955 6836 6769 6720 6259 6342 6638 6384 6651 7411 6934 6786 6003 6007 7027 5153 5834 7782 663 23228 13705 4227 13648 11 3695 1 1 14819 4582 7113 8042 7022 6614 6215 7309 6353 6050 6785 7629 6571 6844 6611 6426 6828 6763 7849 6630 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.05 -0.07 -0.07 0.05 -0.04 -0.01 0.02 0.12 0.15 -0.06 0.02 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.01 -0.03 -0.08 -0.11 0.11 -0.05 0.09 0.03 -0.09 0.04 0.03 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.04 -0.07 0.06 0.05 -0.04 0.14 -0.15 -0.08 -0.04 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.00 0.01 -0.06 0.12 0.09 0.02 0.02 -0.03 0.05 -0.09 -0.08 0.06 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4889

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 882

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 786

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 637

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 453

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 291

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 95

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages