Detailed information of deep learning profile BP000552.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000552.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EBV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.00 -0.00 0.00 0.11 0.13 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 0.08 0.00 0.00 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.01 0.00 0.01 0.02 0.00 0.02 0.02 -0.00 0.12 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.12 0.05 0.00 0.01 -0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5086 5246 5119 4970 5356 5817 5352 5180 5321 7040 5291 5342 5185 5209 5116 4970 6782 5496 5261 6001 5160 5964 9863 30 58 9801 2017 73 1694 20715 20828 402 7030 5388 4037 5626 5058 4609 5049 5265 7214 4985 5291 5260 4968 7008 6471 5126 5119 5092 ]
C [ 5689 4386 4147 4356 5286 4509 5927 5980 6018 4321 4399 4202 6067 4442 4207 4373 4548 4593 4408 3293 5590 2194 2785 62 48 130 7761 86 17434 118 4 5134 7575 5056 6884 4759 4465 6773 4719 6286 4316 6140 4429 4264 6149 4286 4311 5851 6218 4393 ]
G [ 4440 4512 6309 4546 4284 5218 4358 4410 4429 4664 6181 6347 4531 4330 6313 6480 4954 6113 4774 7500 5340 6516 7860 13 9214 7642 1902 20648 10 12 13 2530 2639 4200 3676 5131 6380 4706 4335 4242 4496 4590 4225 6238 4322 4382 4885 4609 4290 4217 ]
T [ 5643 6714 5283 6986 5932 5314 5221 5288 5090 4833 4987 4967 5075 6877 5222 5035 4574 4656 6415 4064 4768 6184 350 20753 11538 3285 9178 51 1720 13 13 12792 3614 6214 6261 5342 4955 4770 6755 5065 4832 5143 6913 5096 5419 5182 5191 5272 5231 7156 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.01 0.04 -0.07 -0.07 0.04 -0.04 -0.00 0.01 0.11 0.13 -0.06 0.02 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 -0.02 -0.05 -0.09 0.09 -0.03 0.09 -0.00 -0.08 0.05 0.02 0.03 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.03 0.05 -0.08 0.04 0.04 -0.03 0.12 -0.11 -0.03 -0.03 0.00 0.00 0.02 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.02 -0.06 0.12 0.08 0.02 0.01 -0.03 0.03 -0.08 -0.06 0.05 -0.01 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2332

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1206

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 646

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 47

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages