Detailed information of deep learning profile BP000552.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000552.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000EBV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 0.01 0.00 0.05 0.12 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.12 -0.00 0.02 0.02 0.00 0.02 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.00 0.01 0.01 0.00 0.00 0.08 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.13 0.11 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 7156 5231 5272 5191 5182 5419 5096 6913 5143 4832 5065 6755 4770 4955 5342 6261 6214 3614 12792 13 13 1720 51 9178 3285 11538 20753 350 6184 4768 4064 6415 4656 4574 5035 5222 6877 5075 4967 4987 4833 5090 5288 5221 5314 5932 6986 5283 6714 5643 ]
C [ 4217 4290 4609 4885 4382 4322 6238 4225 4590 4496 4242 4335 4706 6380 5131 3676 4200 2639 2530 13 12 10 20648 1902 7642 9214 13 7860 6516 5340 7500 4774 6113 4954 6480 6313 4330 4531 6347 6181 4664 4429 4410 4358 5218 4284 4546 6309 4512 4440 ]
G [ 4393 6218 5851 4311 4286 6149 4264 4429 6140 4316 6286 4719 6773 4465 4759 6884 5056 7575 5134 4 118 17434 86 7761 130 48 62 2785 2194 5590 3293 4408 4593 4548 4373 4207 4442 6067 4202 4399 4321 6018 5980 5927 4509 5286 4356 4147 4386 5689 ]
T [ 5092 5119 5126 6471 7008 4968 5260 5291 4985 7214 5265 5049 4609 5058 5626 4037 5388 7030 402 20828 20715 1694 73 2017 9801 58 30 9863 5964 5160 6001 5261 5496 6782 4970 5116 5209 5185 5342 5291 7040 5321 5180 5352 5817 5356 4970 5119 5246 5086 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.00 -0.01 0.05 -0.06 -0.08 0.03 -0.03 0.01 0.02 0.08 0.12 -0.06 0.02 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.02 0.00 0.00 -0.03 -0.03 -0.11 0.12 -0.03 0.04 0.04 -0.08 0.05 0.03 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.03 0.02 0.05 -0.08 -0.00 0.09 -0.03 0.09 -0.09 -0.05 -0.02 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.02 -0.06 0.13 0.11 0.01 -0.00 -0.04 0.04 -0.07 -0.07 0.04 -0.01 -0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2332

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1206

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 646

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 96

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 47

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages