Detailed information of deep learning profile BP000550.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000550.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BUB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.09 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.09 -0.00 0.02 0.01 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.05 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.10 0.10 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 8992 6222 6249 5761 5869 6057 6031 8743 6137 5642 5786 8436 5518 5650 6243 8005 8051 4088 15363 4 0 2470 15 10800 4607 14790 23620 587 7009 5395 4622 8145 5229 5260 5847 6182 8617 6060 5536 5768 5721 5903 6173 6288 6286 7132 8667 6240 8534 6908 ]
C [ 4451 4419 4717 5144 4540 4486 7309 4327 4764 4636 4590 4498 4779 7557 6160 3715 4183 2879 2457 2 0 6 23600 1866 10490 8833 16 9403 6426 5628 8618 4735 7543 5061 7606 7343 4264 4511 7390 7361 4901 4507 4403 4621 5788 4447 4776 7290 4786 4678 ]
G [ 4584 7343 7002 4520 4642 7530 4597 4696 7095 4552 7465 4930 8033 4531 5018 7532 5262 9137 5462 3 141 18173 11 8301 115 29 36 2758 2445 6909 3393 4956 4690 4883 4610 4314 4629 7457 4437 4640 4446 7361 7231 6966 4699 5918 4617 4391 4632 6432 ]
T [ 5668 5711 5727 8270 8644 5622 5758 5929 5699 8865 5854 5831 5365 5957 6274 4443 6199 7591 413 23686 23554 3046 69 2728 8483 43 23 10947 7815 5763 7062 5859 6233 8491 5632 5856 6185 5667 6332 5926 8627 5924 5888 5820 6922 6198 5635 5774 5743 5677 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.00 -0.00 0.04 -0.05 -0.07 0.03 -0.02 0.01 0.02 0.07 0.09 -0.04 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.03 -0.05 -0.09 0.09 -0.03 0.03 0.03 -0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.05 0.00 0.06 -0.03 0.08 -0.07 -0.06 -0.02 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 0.00 0.01 -0.04 0.10 0.10 0.02 -0.00 -0.02 0.03 -0.06 -0.05 0.04 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6491

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 264

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 222

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 78

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 29

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages