Detailed information of deep learning profile BP000550.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000550.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BUB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.10 0.10 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.03 -0.00 0.05 0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.01 0.02 -0.00 0.09 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.09 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5677 5743 5774 5635 6198 6922 5820 5888 5924 8627 5926 6332 5667 6185 5856 5632 8491 6233 5859 7062 5763 7815 10947 23 43 8483 2728 69 3046 23554 23686 413 7591 6199 4443 6274 5957 5365 5831 5854 8865 5699 5929 5758 5622 8644 8270 5727 5711 5668 ]
C [ 6432 4632 4391 4617 5918 4699 6966 7231 7361 4446 4640 4437 7457 4629 4314 4610 4883 4690 4956 3393 6909 2445 2758 36 29 115 8301 11 18173 141 3 5462 9137 5262 7532 5018 4531 8033 4930 7465 4552 7095 4696 4597 7530 4642 4520 7002 7343 4584 ]
G [ 4678 4786 7290 4776 4447 5788 4621 4403 4507 4901 7361 7390 4511 4264 7343 7606 5061 7543 4735 8618 5628 6426 9403 16 8833 10490 1866 23600 6 0 2 2457 2879 4183 3715 6160 7557 4779 4498 4590 4636 4764 4327 7309 4486 4540 5144 4717 4419 4451 ]
T [ 6908 8534 6240 8667 7132 6286 6288 6173 5903 5721 5768 5536 6060 8617 6182 5847 5260 5229 8145 4622 5395 7009 587 23620 14790 4607 10800 15 2470 0 4 15363 4088 8051 8005 6243 5650 5518 8436 5786 5642 6137 8743 6031 6057 5869 5761 6249 6222 8992 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 0.04 -0.05 -0.06 0.03 -0.02 -0.00 0.02 0.10 0.10 -0.04 0.01 0.00 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.02 -0.06 -0.07 0.08 -0.03 0.06 0.00 -0.05 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.05 0.03 0.03 -0.03 0.09 -0.09 -0.05 -0.03 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.04 0.09 0.07 0.02 0.01 -0.02 0.03 -0.07 -0.05 0.04 -0.00 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6491

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1701

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 264

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 222

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 78

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 29

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages