Detailed information of deep learning profile BP000547.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000547.1
Cell line/tissue: HCT116
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BSD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.07 0.07 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.02 0.01 -0.00 0.07 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.07 0.03 0.00 0.01 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2546 2652 2558 3156 2711 2643 2491 2522 2554 2526 3422 2752 2596 3116 2716 2780 4742 14 31 4747 1100 24 1961 9902 9992 158 3336 2640 1978 2644 2624 2266 2576 2867 3961 2779 2553 2525 2456 3288 3061 2491 2567 2570 2743 2637 2929 2766 2655 2747 ]
C [ 2635 2667 2824 2178 2071 2042 2752 2321 2011 2053 2017 2198 2118 1654 2347 1218 1594 25 17 44 2267 9 6550 102 2 2604 3559 2342 2927 2160 1940 2669 2163 2941 1883 2552 2223 2184 2841 2080 2137 2567 2790 2155 2490 2319 2132 2662 2600 2034 ]
G [ 2155 2130 2039 2119 2789 2690 2047 2003 2617 2911 2238 2815 2199 3096 2737 3133 3439 9 4860 3614 868 9957 12 0 2 1214 1265 1961 1861 2520 2663 2709 2183 1882 1952 1988 1985 2693 2007 2089 2245 2235 2066 2009 2193 2316 2437 2069 2049 2185 ]
T [ 2668 2555 2583 2551 2433 2629 2714 3158 2822 2514 2327 2239 3091 2138 2204 2873 229 9956 5096 1599 5769 14 1481 0 8 6028 1844 3061 3238 2680 2777 2360 3082 2314 2208 2685 3243 2602 2700 2547 2561 2711 2581 3270 2578 2732 2506 2507 2700 3038 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.03 -0.04 -0.05 0.03 -0.02 -0.01 0.01 0.07 0.07 -0.04 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.01 -0.01 -0.04 -0.05 0.06 -0.02 0.05 0.01 -0.03 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.04 0.03 0.03 -0.02 0.07 -0.07 -0.04 -0.02 0.01 0.00 0.01 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.03 0.07 0.05 0.01 0.01 -0.01 0.02 -0.05 -0.03 0.03 -0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 24

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000555.1 CEBPB ENCSR000EEX HepG2 Homo sapiens MA0466.4
BP000556.1 CEBPB ENCSR000EFM IMR-90 Homo sapiens MA0466.4
BP000557.1 CEBPB ENCSR000EHE K562 Homo sapiens MA0466.4
BP000558.1 CEBPB ENCSR182OZC A549 Homo sapiens MA0466.4
BP000559.1 CEBPB ENCSR190VMK A549 Homo sapiens MA0466.4
BP000560.1 CEBPB ENCSR216GEB A549 Homo sapiens MA0466.4
BP000561.1 CEBPB ENCSR269IUA A549 Homo sapiens MA0466.4
BP000562.1 CEBPB ENCSR299ILN A549 Homo sapiens MA0466.4
BP000563.1 CEBPB ENCSR375BUB A549 Homo sapiens MA0466.4
BP000564.1 CEBPB ENCSR416QLJ K562 Homo sapiens MA0466.4
Showing 10 profiles of page 2 from 3 pages