Detailed information of deep learning profile BP000547.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000547.1
Cell line/tissue: HCT116
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BSD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.01 0.00 0.03 0.07 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.07 -0.00 0.01 0.02 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.02 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.07 0.07 0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 3038 2700 2507 2506 2732 2578 3270 2581 2711 2561 2547 2700 2602 3243 2685 2208 2314 3082 2360 2777 2680 3238 3061 1844 6028 8 0 1481 14 5769 1599 5096 9956 229 2873 2204 2138 3091 2239 2327 2514 2822 3158 2714 2629 2433 2551 2583 2555 2668 ]
C [ 2185 2049 2069 2437 2316 2193 2009 2066 2235 2245 2089 2007 2693 1985 1988 1952 1882 2183 2709 2663 2520 1861 1961 1265 1214 2 0 12 9957 868 3614 4860 9 3439 3133 2737 3096 2199 2815 2238 2911 2617 2003 2047 2690 2789 2119 2039 2130 2155 ]
G [ 2034 2600 2662 2132 2319 2490 2155 2790 2567 2137 2080 2841 2184 2223 2552 1883 2941 2163 2669 1940 2160 2927 2342 3559 2604 2 102 6550 9 2267 44 17 25 1594 1218 2347 1654 2118 2198 2017 2053 2011 2321 2752 2042 2071 2178 2824 2667 2635 ]
T [ 2747 2655 2766 2929 2637 2743 2570 2567 2491 3061 3288 2456 2525 2553 2779 3961 2867 2576 2266 2624 2644 1978 2640 3336 158 9992 9902 1961 24 1100 4747 31 14 4742 2780 2716 3116 2596 2752 3422 2526 2554 2522 2491 2643 2711 3156 2558 2652 2546 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.01 0.03 -0.03 -0.05 0.02 -0.01 0.01 0.01 0.05 0.07 -0.03 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 0.00 0.01 -0.02 -0.04 -0.07 0.07 -0.02 0.03 0.03 -0.04 0.03 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.03 -0.03 0.01 0.05 -0.02 0.06 -0.05 -0.04 -0.01 0.01 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.04 0.07 0.07 0.01 -0.01 -0.02 0.03 -0.05 -0.04 0.03 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 6161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 24

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000548.1 CEBPB ENCSR000BSR MCF-7 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages