Detailed information of deep learning profile BP000528.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000528.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR070VXO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 -0.00 0.01 0.00 0.01 0.07 0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.10 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.04 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.07 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.09 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 -0.00 0.02 0.00 0.05 0.00 -0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

A [ 3420 3374 3294 3280 3409 3354 3351 3299 3430 3443 3513 3269 3308 3335 3224 4243 3789 6117 88 6348 12254 0 10923 2031 3763 3336 2878 18 941 2824 1783 2296 2817 3185 3040 3331 3265 3286 3564 3477 3536 3360 3204 3341 3340 3317 3329 3492 3530 3484 ]
C [ 2746 2671 2782 2757 2679 2866 2928 3090 2973 2839 2597 2708 2710 2298 3362 3355 2675 137 3 1042 2 12298 38 2663 2313 3940 1211 38 505 3057 7907 3844 2757 2182 2715 3055 3133 3080 2792 2678 2592 2602 2718 2762 2805 2711 2806 2796 2714 2746 ]
G [ 2798 2860 2949 2860 2764 2704 2715 2599 2717 2695 2846 3090 3015 3203 2750 1671 2994 4597 12173 2024 14 0 661 3120 2133 2912 561 12231 319 2266 153 625 2859 2940 2807 2606 2548 2648 2626 2821 2777 2925 3005 2962 2701 2822 2750 2796 2871 2799 ]
T [ 3334 3393 3273 3401 3446 3374 3304 3310 3178 3321 3342 3231 3265 3462 2962 3029 2840 1447 34 2884 28 0 676 4484 4089 2110 7648 11 10533 4151 2455 5533 3865 3991 3736 3306 3352 3284 3316 3322 3393 3411 3371 3233 3452 3448 3413 3214 3183 3269 ]

Hypothetical CWM

A [ -0.00 0.00 0.01 0.00 0.02 -0.00 0.02 0.07 -0.06 0.04 -0.00 0.01 0.01 -0.01 -0.01 -0.01 0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.02 -0.05 -0.01 -0.04 0.10 -0.04 0.01 0.01 0.01 0.03 -0.02 -0.02 0.00 0.06 0.02 0.01 -0.00 0.01 0.01 ]
G [ 0.01 0.00 -0.01 0.01 0.02 0.07 0.00 -0.03 -0.03 0.03 0.01 0.00 0.01 -0.03 0.09 -0.03 -0.01 -0.05 -0.01 0.01 0.01 0.00 0.00 ]
T [ 0.00 -0.00 0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.00 -0.01 0.01 0.01 -0.00 0.03 -0.05 0.06 0.01 -0.00 0.02 0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8932

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3087

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2374

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1133

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 907

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 694

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 520

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 513

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 448

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 254

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 221

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 156

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 86

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 42

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 25

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000529.1 NR3C1 ENCSR255CTA A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
BP000533.1 NR3C1 ENCSR458VTP A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages