Detailed information of deep learning profile BP000528.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000528.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
JASPAR ID: MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR070VXO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 0.00 0.00 0.01 -0.00 0.00 0.05 0.00 0.02 -0.00 0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.09 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.07 0.01 0.00 -0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.04 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.10 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.00 0.07 0.01 0.00 0.01 -0.00 0.00 0.00 ]

Frequency matrix

A [ 3269 3183 3214 3413 3448 3452 3233 3371 3411 3393 3322 3316 3284 3352 3306 3736 3991 3865 5533 2455 4151 10533 11 7648 2110 4089 4484 676 0 28 2884 34 1447 2840 3029 2962 3462 3265 3231 3342 3321 3178 3310 3304 3374 3446 3401 3273 3393 3334 ]
C [ 2799 2871 2796 2750 2822 2701 2962 3005 2925 2777 2821 2626 2648 2548 2606 2807 2940 2859 625 153 2266 319 12231 561 2912 2133 3120 661 0 14 2024 12173 4597 2994 1671 2750 3203 3015 3090 2846 2695 2717 2599 2715 2704 2764 2860 2949 2860 2798 ]
G [ 2746 2714 2796 2806 2711 2805 2762 2718 2602 2592 2678 2792 3080 3133 3055 2715 2182 2757 3844 7907 3057 505 38 1211 3940 2313 2663 38 12298 2 1042 3 137 2675 3355 3362 2298 2710 2708 2597 2839 2973 3090 2928 2866 2679 2757 2782 2671 2746 ]
T [ 3484 3530 3492 3329 3317 3340 3341 3204 3360 3536 3477 3564 3286 3265 3331 3040 3185 2817 2296 1783 2824 941 18 2878 3336 3763 2031 10923 0 12254 6348 88 6117 3789 4243 3224 3335 3308 3269 3513 3443 3430 3299 3351 3354 3409 3280 3294 3374 3420 ]

Hypothetical CWM

A [ -0.00 0.00 0.01 0.00 0.02 -0.00 0.01 0.06 -0.05 0.03 -0.00 0.01 0.01 -0.01 -0.00 -0.01 0.01 -0.01 -0.01 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.01 -0.05 -0.01 -0.03 0.09 -0.03 0.01 0.00 0.01 0.03 -0.03 -0.03 0.00 0.07 0.02 0.01 -0.01 0.00 0.01 ]
G [ 0.01 0.01 -0.00 0.01 0.02 0.06 0.00 -0.02 -0.02 0.03 0.01 0.01 0.01 -0.04 0.10 -0.04 -0.01 -0.05 -0.02 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 0.01 0.01 -0.00 0.04 -0.06 0.07 0.02 -0.00 0.02 0.00 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 8932

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3087

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2374

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1133

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 907

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 694

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 520

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 513

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 448

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 254

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 221

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 156

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 86

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 42

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 25

20 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000523.1 NR3C1 ENCSR000BHE A549 Homo sapiens MA0113.4
BP000524.1 NR3C1 ENCSR000BHF A549 Homo sapiens MA0113.4
BP000525.1 NR3C1 ENCSR000BHG A549 Homo sapiens MA0113.4
BP000526.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens MA0113.4
BP000527.1 NR3C1 ENCSR000BJR A549 Homo sapiens MA0113.4
BP000529.1 NR3C1 ENCSR255CTA A549 Homo sapiens MA0113.4
BP000530.1 NR3C1 ENCSR287FWE A549 Homo sapiens MA0113.4
BP000531.1 NR3C1 ENCSR385RUW A549 Homo sapiens MA0113.4
BP000532.1 NR3C1 ENCSR424JOE A549 Homo sapiens MA0113.4
BP000533.1 NR3C1 ENCSR458VTP A549 Homo sapiens MA0113.4
Showing 10 profiles of page 1 from 2 pages