Detailed information of deep learning profile BP000485.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000485.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000FAE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.08 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.10 0.00 0.13 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.11 0.00 0.11 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.09 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 500 512 540 490 495 540 487 506 495 507 461 485 493 508 484 517 455 543 545 565 666 290 27 2506 0 7 22 0 521 233 295 475 457 490 474 520 462 506 491 488 459 508 512 543 524 495 483 499 486 484 ]
C [ 879 759 780 803 809 805 782 801 788 756 838 815 868 896 818 785 816 811 751 621 523 1356 2593 0 2623 0 1 2 738 892 1089 858 835 751 789 829 777 742 792 766 882 793 821 770 765 763 798 779 813 779 ]
G [ 773 810 787 786 813 768 810 817 807 882 828 796 775 749 830 843 857 866 785 1007 1070 374 3 29 0 2616 0 2616 822 656 637 781 849 892 898 768 828 886 821 915 781 819 773 832 813 857 863 824 807 838 ]
T [ 471 542 516 544 506 510 544 499 533 478 496 527 487 470 491 478 495 403 542 430 364 603 0 88 0 0 2600 5 542 842 602 509 482 490 462 506 556 489 519 454 501 503 517 478 521 508 479 521 517 522 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.02 -0.00 -0.02 0.09 -0.09 0.03 -0.02 -0.06 0.00 -0.01 0.00 -0.00 ]
C [ 0.01 0.00 -0.01 0.01 0.10 -0.10 0.13 -0.10 0.04 -0.07 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.02 0.01 -0.06 0.03 -0.09 0.11 -0.10 0.11 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.02 0.00 -0.06 -0.02 0.03 -0.10 0.09 -0.02 -0.00 0.02 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 959

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 365

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 107

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages