Detailed information of deep learning profile BP000478.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000478.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000ECN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.06 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 -0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1136 1068 1149 1117 1071 1142 1109 1004 1087 1043 1059 982 1057 1038 1068 1015 947 954 1099 1114 1212 1541 745 4 5574 0 4 509 0 764 854 877 1016 850 966 1062 1009 985 1036 1147 1079 1039 1114 1026 1079 1081 1042 1017 1059 1051 ]
C [ 1760 1811 1705 1704 1703 1696 1669 1734 1689 1766 1668 1801 1765 1852 1847 1738 1953 1871 1873 1693 1448 1355 1552 5600 0 5602 0 884 1 620 2546 1941 1603 1865 1671 1809 1774 1630 1681 1629 1713 1779 1752 1794 1745 1671 1722 1772 1690 1763 ]
G [ 1681 1692 1696 1693 1784 1734 1726 1795 1740 1775 1864 1741 1781 1732 1683 1833 1685 1751 1747 1944 2082 1967 2211 3 5 0 5603 2 5473 3576 1134 1559 1970 1780 1986 1730 1765 1882 1891 1793 1775 1709 1739 1722 1723 1769 1760 1759 1707 1764 ]
T [ 1030 1036 1057 1093 1049 1035 1103 1074 1091 1023 1016 1083 1004 985 1009 1021 1022 1031 888 856 865 744 1099 0 28 5 0 4212 133 647 1073 1230 1018 1112 984 1006 1059 1110 999 1038 1040 1080 1002 1065 1060 1086 1083 1059 1151 1029 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 -0.00 -0.00 0.04 -0.04 0.02 -0.01 -0.03 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.05 -0.04 0.06 -0.04 0.03 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.03 0.03 -0.04 0.06 -0.04 0.05 0.01 -0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.03 -0.01 0.02 -0.04 0.03 0.00 -0.00 0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 6094

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2829

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1763

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1544

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1370

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1130

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 827

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages