Detailed information of deep learning profile BP000473.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000473.1
Cell line/tissue: Ishikawa
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000BTY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 -0.00 0.04 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.04 -0.00 0.03 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2789 2662 2703 2669 2515 2726 2663 2621 2553 2776 2655 2678 2682 2521 2565 2713 2656 3512 4353 1567 14 13679 0 1695 1321 50 1330 1887 2656 2588 2469 2683 2680 2614 2524 2691 2708 2655 2525 2810 2746 2824 2870 2707 2631 2751 2690 2713 2639 2552 ]
C [ 4167 4130 4143 4084 4236 4293 4218 4279 4375 4218 4278 4341 4177 4406 4181 4630 4146 3556 2623 3092 13837 2 11302 35 2844 123 2037 6412 4277 3974 4333 4056 4163 4410 4184 4109 4049 4128 4323 4184 4188 4247 4044 4024 4265 4044 4139 4150 4033 4249 ]
G [ 4137 4415 4292 4329 4271 4094 4315 4567 4148 4243 4429 4259 4480 4135 4456 4246 4461 4651 4911 7690 3 123 218 12124 12 13174 8971 2539 3762 4645 4345 4648 4486 4166 4488 4539 4416 4521 4310 4169 4262 4298 4210 4480 4231 4266 4315 4392 4325 4301 ]
T [ 2762 2648 2717 2773 2833 2742 2659 2388 2779 2618 2493 2577 2516 2793 2653 2266 2592 2136 1968 1506 1 51 2335 1 9678 508 1517 3017 3160 2648 2708 2468 2526 2665 2659 2516 2682 2551 2697 2692 2659 2486 2731 2644 2728 2794 2711 2600 2858 2753 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 -0.04 0.00 -0.01 -0.02 -0.01 -0.01 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.04 -0.03 0.04 -0.03 0.02 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.02 0.04 -0.03 0.04 0.01 -0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.01 -0.01 -0.02 -0.02 0.01 -0.04 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4825

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1848

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 812

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 790

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 366

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 165

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 65

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 59

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 23

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages