Detailed information of deep learning profile BP000480.1

  1. Home
  2. Deep Learning Profile > BP000480.1
This page shows detailed deep learning-derived predictions and motifs for MAX in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000480.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EEZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 0.00 0.07 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.01 0.10 -0.00 0.10 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.12 0.00 0.11 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.07 -0.00 -0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 911 886 875 847 936 809 928 829 852 785 903 849 903 844 877 741 889 782 912 1048 631 39 4087 0 0 27 0 1149 530 600 846 755 817 768 852 756 871 888 906 800 933 881 940 891 861 828 927 879 874 820 ]
C [ 1276 1380 1337 1323 1266 1416 1290 1346 1370 1471 1260 1414 1391 1374 1422 1463 1302 1428 1133 1095 2314 4302 1 4343 0 2 1 1369 1629 1556 1468 1467 1266 1486 1380 1370 1279 1288 1315 1425 1284 1397 1299 1304 1327 1421 1310 1291 1307 1386 ]
G [ 1298 1182 1259 1232 1263 1223 1293 1244 1316 1150 1301 1176 1247 1274 1214 1217 1442 1213 1683 1496 713 2 7 0 4343 0 4342 1057 874 963 1184 1209 1340 1222 1273 1248 1394 1212 1278 1204 1277 1171 1236 1188 1301 1183 1165 1233 1304 1191 ]
T [ 859 896 873 942 879 896 833 925 806 938 880 905 803 852 831 923 711 921 616 705 686 1 249 1 1 4315 1 769 1311 1225 846 913 921 868 839 970 800 956 845 915 850 895 869 961 855 912 942 941 859 947 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.01 -0.00 -0.02 0.07 -0.10 0.04 -0.03 -0.06 0.00 -0.02 -0.01 -0.00 ]
C [ 0.01 0.00 -0.00 0.01 0.10 -0.07 0.10 -0.08 0.02 -0.07 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.01 -0.06 0.03 -0.09 0.12 -0.07 0.11 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.01 0.00 -0.06 -0.02 0.04 -0.09 0.08 -0.01 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2722

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 803

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages