Detailed information of deep learning profile BP000483.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000483.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000EUP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 0.00 0.06 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.10 0.00 0.09 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.09 0.00 0.09 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.05 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 473 480 468 483 466 448 478 449 470 494 481 524 498 466 492 446 468 566 880 362 3 2154 0 0 159 6 274 300 371 475 419 497 462 475 462 499 521 488 480 497 512 514 488 499 465 466 463 476 440 476 ]
C [ 608 614 599 592 648 637 624 625 610 597 623 658 591 635 654 687 559 581 390 489 2213 0 2216 0 117 4 247 981 729 574 696 617 661 702 587 589 576 623 646 610 626 614 631 603 649 599 664 560 612 620 ]
G [ 635 631 649 626 612 625 622 679 659 596 648 589 649 628 613 670 671 725 620 1069 0 44 0 2216 0 2144 1387 316 526 669 628 647 697 569 691 649 647 665 617 639 597 654 677 638 593 676 595 694 659 643 ]
T [ 500 491 500 515 490 506 492 463 477 529 464 445 478 487 457 413 518 344 326 296 0 18 0 0 1940 62 308 619 590 498 473 455 396 470 476 479 472 440 473 470 481 434 420 476 509 475 494 486 505 477 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.01 -0.01 -0.01 0.06 -0.08 0.02 -0.02 -0.05 -0.01 -0.02 -0.00 -0.00 ]
C [ 0.00 0.01 -0.01 0.01 0.10 -0.09 0.09 -0.05 0.03 -0.06 0.02 0.02 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.02 -0.06 0.03 -0.05 0.09 -0.09 0.09 0.02 -0.01 0.01 0.00 ]
T [ -0.00 -0.01 -0.02 -0.02 -0.05 -0.02 0.02 -0.08 0.06 -0.01 -0.01 0.02 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1829

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 550

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 157

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 119

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 113

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000477.1 MAX ENCSR000DZF GM12878 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages