Detailed information of deep learning profile BP000477.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000477.1
Cell line/tissue: GM12878
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DZF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 -0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 693 696 734 645 712 678 664 684 678 593 599 677 659 673 606 591 628 666 635 733 995 568 7 3663 0 0 421 0 867 403 588 599 530 680 580 644 618 662 699 658 620 669 699 687 737 697 685 681 682 687 ]
C [ 1204 1141 1164 1202 1156 1157 1183 1163 1154 1210 1223 1197 1241 1274 1146 1296 1318 1196 1189 1163 1131 1120 3688 0 3693 0 6 0 338 1868 1348 1137 1217 1153 1191 1175 1149 1148 1180 1132 1210 1186 1181 1199 1093 1148 1153 1142 1169 1159 ]
G [ 1138 1195 1088 1151 1149 1149 1181 1161 1165 1261 1223 1133 1134 1102 1241 1141 1082 1218 1230 1330 948 1347 0 0 0 3695 4 3613 2025 782 951 1227 1253 1288 1303 1179 1199 1239 1133 1240 1150 1181 1107 1177 1171 1187 1176 1161 1141 1166 ]
T [ 660 663 709 697 678 711 667 687 698 631 650 688 661 646 702 667 667 615 641 469 621 660 0 32 2 0 3264 82 465 642 808 732 695 574 621 697 729 646 683 665 715 659 708 632 694 663 681 711 703 683 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 -0.01 0.04 -0.05 0.02 -0.01 -0.02 -0.00 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.05 -0.04 0.05 -0.03 0.02 -0.03 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.03 0.02 -0.04 0.06 -0.04 0.04 0.01 0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 0.02 -0.05 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 379

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 141

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000479.1 MAX ENCSR000EDS HepG2 Homo sapiens MA0058.4
BP000480.1 MAX ENCSR000EEZ endothelial cell of umbilical vein Homo sapiens MA0058.4
BP000481.1 MAX ENCSR000EFV K562 Homo sapiens MA0058.4
BP000482.1 MAX ENCSR000EHS NB4 Homo sapiens MA0058.4
BP000483.1 MAX ENCSR000EUP H1 Homo sapiens MA0058.4
BP000484.1 MAX ENCSR000EZF HeLa-S3 Homo sapiens MA0058.4
BP000485.1 MAX ENCSR000FAE K562 Homo sapiens MA0058.4
BP000486.1 MAX ENCSR158LJN K562 Homo sapiens MA0058.4
BP000487.1 MAX ENCSR168DYA HepG2 Homo sapiens MA0058.4
BP000488.1 MAX ENCSR349FYX WTC11 Homo sapiens MA0058.4
Showing 10 profiles of page 2 from 3 pages