Detailed information of deep learning profile BP000477.1

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This page shows detailed deep learning-derived predictions and motifs for MAX in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MAX
Model ID: BP000477.1
Cell line/tissue: GM12878
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0058.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR000DZF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 -0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 683 703 711 681 663 694 632 708 659 715 665 683 646 729 697 621 574 695 732 808 642 465 82 3264 0 2 32 0 660 621 469 641 615 667 667 702 646 661 688 650 631 698 687 667 711 678 697 709 663 660 ]
C [ 1166 1141 1161 1176 1187 1171 1177 1107 1181 1150 1240 1133 1239 1199 1179 1303 1288 1253 1227 951 782 2025 3613 4 3695 0 0 0 1347 948 1330 1230 1218 1082 1141 1241 1102 1134 1133 1223 1261 1165 1161 1181 1149 1149 1151 1088 1195 1138 ]
G [ 1159 1169 1142 1153 1148 1093 1199 1181 1186 1210 1132 1180 1148 1149 1175 1191 1153 1217 1137 1348 1868 338 0 6 0 3693 0 3688 1120 1131 1163 1189 1196 1318 1296 1146 1274 1241 1197 1223 1210 1154 1163 1183 1157 1156 1202 1164 1141 1204 ]
T [ 687 682 681 685 697 737 687 699 669 620 658 699 662 618 644 580 680 530 599 588 403 867 0 421 0 0 3663 7 568 995 733 635 666 628 591 606 673 659 677 599 593 678 684 664 678 712 645 734 696 693 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 -0.05 0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.01 0.04 -0.04 0.06 -0.04 0.02 -0.03 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.03 0.02 -0.03 0.05 -0.04 0.05 0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.00 -0.02 -0.01 0.02 -0.05 0.04 -0.01 0.00 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 379

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 288

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 141

CWM

PFM

     

HCWM

22 profiles found for the same TF (MAX) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000468.1 MAX ENCSR000BLP K562 Homo sapiens MA0058.4
BP000469.1 MAX ENCSR000BSH HCT116 Homo sapiens MA0058.4
BP000470.1 MAX ENCSR000BSJ H1 Homo sapiens MA0058.4
BP000471.1 MAX ENCSR000BTJ A549 Homo sapiens MA0058.4
BP000472.1 MAX ENCSR000BTM HepG2 Homo sapiens MA0058.4
BP000473.1 MAX ENCSR000BTY Ishikawa Homo sapiens MA0058.4
BP000474.1 MAX ENCSR000BUL MCF-7 Homo sapiens MA0058.4
BP000475.1 MAX ENCSR000BVD SK-N-SH Homo sapiens MA0058.4
BP000476.1 MAX ENCSR000DYG A549 Homo sapiens MA0058.4
BP000478.1 MAX ENCSR000ECN HeLa-S3 Homo sapiens MA0058.4
Showing 10 profiles of page 1 from 3 pages